RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LYZL6O75951 148 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 UBL3O95164 117 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 IL18BPO95998 194 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 WNT11O96014 354 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PTHP01270 115 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 IGHA1P01876 353 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 APOC1P02654 83 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PRB1P04280 392 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LCKP06239 509 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HTR1AP08908 422 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GAAP10253 952 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CD8BP10966 210 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ALOX5APP20292 161 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 EDNRAP25101 427 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ARR3P36575 388 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF133P52736 654 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TAS2R43P59537 309 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GALK2Q01415 458 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF85Q03923 595 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TLE1Q04724 770 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 EGR3Q06889 387 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 P2RY6Q15077 328 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 KCNMB1Q16558 191 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SOWAHCQ53LP3 525 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ARMCX4Q5H9R4 360 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TEX30Q5JUR7 227 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 RNLSQ5VYX0 342 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LRRN1Q6UXK5 716 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SEM1Q6ZVN7 128 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BHLHA15Q7RTS1 189 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CXorf67Q86X51 503 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CCDC36Q8IYA8 594 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF283Q8N7M2 679 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GALNT11Q8NCW6 608 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR1K1Q8NGR3 316 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR52N5Q8NH56 324 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HAVCR2Q8TDQ0 301 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ASB5Q8WWX0 329 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 UFD1Q92890 307 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SPTSSAQ969W0 71 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NMD3Q96D46 503 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 WACQ9BTA9 647 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HDHD5Q9BXW7 423 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ELOVL3Q9HB03 270 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BRD7Q9NPI1 651 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BABAM2Q9NXR7 383 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF629Q9UEG4 869 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 Q9UFV3 132 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GDF2Q9UK05 429 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 COPS3Q9UNS2 423 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 UGT2A1Q9Y4X1 527 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ATMQ13315 3056 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MED12LQ86YW9 2145 aa9.37□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PHF3Q92576 2039 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 B8ZZF3 427 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF878C9JN71 531 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MAGEB4O15481 346 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LRRTM2O43300 516 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 DOK2O60496 412 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF254O75437 659 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TNFSF13O75888 250 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TOXO94900 526 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 INMTO95050 263 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SMIM18P0DKX4 95 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CCNOP22674 350 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 IGHV1-2P23083 117 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TTKP33981 857 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PSMB10P40306 273 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SLC6A9P48067 706 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR12D2P58182 307 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GRB2P62993 217 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ECH1Q13011 328 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MRPL28Q13084 256 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BLMHQ13867 455 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 IGFBP7Q16270 282 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TSTQ16762 297 aaKnown RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF829Q3KNS6 432 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NRN1LQ496H8 165 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 VASH1Q7L8A9 365 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LINGO2Q7L985 606 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SKA3Q8IX90 412 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF679Q8IYX0 411 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CA5BP1Q8WTZ4 195 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MUCL1Q96DR8 90 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR8B4Q96RC9 309 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MGLLQ99685 303 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 JAM3Q9BX67 310 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BATF3Q9NR55 127 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SLCO1C1Q9NYB5 712 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MALT1Q9UDY8 824 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ERRFI1Q9UJM3 462 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SLC5A6Q9Y289 635 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 COL6A6A6NMZ7 2263 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SHANK1Q9Y566 2161 aa9.36□□□□□ -0.91
TNFRSF1A-211ENST00000538363 DOCK7Q96N67 2140 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms