RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 KCNA7Q96RP8 456 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 CITED2Q99967 270 aaPredicted RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 MCRIP2Q9BUT9 160 aaKnown RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 EFCAB1Q9HAE3 211 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 MAN2C1Q9NTJ4 1040 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 ERVK-18Q9QC07 812 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 POMPQ9Y244 141 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 BBIP1A8MTZ0 92 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 OR2T1O43869 369 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 BCAS1O75363 584 aaPredicted RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 MMP9P14780 707 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SLC6A2P23975 617 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 CSNK1A1P48729 337 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 COX10Q12887 443 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 TYW3Q6IPR3 259 aaKnown RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 OGFOD2Q6N063 350 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 SLC16A14Q7RTX9 510 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 OR5AK3PQ8NH89 298 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 CLHC1Q8NHS4 586 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 KLF14Q8TD94 323 aaPredicted RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 RSRC1Q96IZ7 334 aaKnown RBP7.56□□□□□ -1.2
USP28-205ENST00000537706 ZNF570Q96NI8 536 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 TMEM246Q9BRR3 403 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 DNAH3Q8TD57 4116 aa7.56□□□□□ -1.2
USP28-205ENST00000537706 LOC102725191A0A1B0GVB3 256 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 NPIPB8E9PQR5 432 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 FSTL3O95633 263 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 C6orf47O95873 294 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 CHEK2O96017 543 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 QDPRP09417 244 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 ALDOCP09972 364 aaKnown RBP7.55□□□□□ -1.2
USP28-205ENST00000537706 ACADSP16219 412 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 FOXA1P55317 472 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 DGCR2P98153 550 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 TAF11Q15544 211 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 GPAT3Q53EU6 434 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 HACD2Q6Y1H2 254 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 DCDC5Q6ZRR9 648 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 H1FNTQ75WM6 255 aaPredicted RBP7.55□□□□□ -1.2
USP28-205ENST00000537706 C8orf46Q8TAG6 207 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 NRG4Q8WWG1 115 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 XAGE5Q8WWM1 108 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 ASCL2Q99929 193 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 DCTN5Q9BTE1 182 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 TUBB1Q9H4B7 451 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 S100A14Q9HCY8 104 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 TMED5Q9Y3A6 229 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 LRRC42Q9Y546 428 aa7.55□□□□□ -1.2
USP28-205ENST00000537706 C22orf46C9J442 243 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 THY1P04216 161 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 CHRM2P08172 466 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 IRF2P14316 349 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 IDO1P14902 403 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 LBPP18428 481 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 SDC1P18827 310 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 GSTM3P21266 225 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 PRPH2P23942 346 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 RPS5P46782 204 aaKnown RBP7.54□□□□□ -1.2
USP28-205ENST00000537706 GDI2P50395 445 aaKnown RBP7.54□□□□□ -1.2
USP28-205ENST00000537706 GTF2A1P52655 376 aaPredicted RBP7.54□□□□□ -1.2
USP28-205ENST00000537706 RPS26P62854 115 aaKnown RBP7.54□□□□□ -1.2
USP28-205ENST00000537706 KCNJ8Q15842 424 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ZNF404Q494X3 552 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 AGKQ53H12 422 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 SPRNQ5BIV9 151 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
USP28-205ENST00000537706 ARL9Q6T311 187 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 C5orf46Q6UWT4 87 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 OLIG3Q7RTU3 272 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 C6orf120Q7Z4R8 191 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 DHDDSQ86SQ9 333 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 DNAJC9Q8WXX5 260 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ROPN1LQ96C74 230 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 RCHY1Q96PM5 261 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 OR2J1Q9GZK6 312 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 OR51I1Q9H343 314 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ELOVL3Q9HB03 270 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 SDR39U1Q9NRG7 319 aaPredicted RBP7.54□□□□□ -1.2
USP28-205ENST00000537706 B3GAT1Q9P2W7 334 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 DNAH9Q9NYC9 4486 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 DNAH1Q9P2D7 4330 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 A0A1W2PRX2 142 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 MRASO14807 208 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 OPN1SWP03999 348 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 PPP1CBP62140 327 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 COQ5Q5HYK3 327 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ADAMTSL5Q6ZMM2 481 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 RNF165Q6ZSG1 346 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 HOMEZQ8IX15 550 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 PDZD9Q8IXQ8 264 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 SCAIQ8N9R8 606 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ADPRHL1Q8NDY3 354 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 ABHD4Q8TB40 342 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 SLC38A4Q969I6 547 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 TUBGCP3Q96CW5 907 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 OR2V2Q96R30 315 aa7.54□□□□□ -1.2
USP28-205ENST00000537706 SH3GL3Q99963 347 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms