RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SSBP1Q04837 148 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 PRRT3Q5FWE3 981 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 TMEM196Q5HYL7 178 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 NIPAL3Q6P499 406 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 RPTNQ6XPR3 784 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 Q6ZVL8 140 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 GKN2Q86XP6 184 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 APOBEC4Q8WW27 367 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 COL26A1Q96A83 441 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC17A9Q9BYT1 436 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC6A16Q9GZN6 736 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 RAB33BQ9H082 229 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC25A18Q9H1K4 315 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SH2B3Q9UQQ2 575 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 C9J4A7 227 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 FAM157CP0CG43 387 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MAS1LP35410 378 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CLDN12P56749 244 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 ACTA2P62736 377 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 ACTG2P63267 376 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 DHRS2Q13268 280 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 ARSJQ5FYB0 599 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 DCXRQ7Z4W1 244 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 RAB8BQ92930 207 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 NUS1Q96E22 293 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 GPA33Q99795 319 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CCDC3Q9BQI4 270 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TMEM121BQ9BXQ6 578 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 ZDHHC3Q9NYG2 299 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 KCNG2Q9UJ96 466 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 FBXO7Q9Y3I1 522 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 EP300Q09472 2414 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TRBV2A0A0J9YWF9 115 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CDRT15L2A8MXV6 281 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 RPL36A-HNRNPH2H7BZ11 118 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TP53I11O14683 189 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 LRP3O75074 770 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PAPLNO95428 1278 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 AIFM1O95831 613 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TNFP01375 233 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 IGLV3-25P01717 112 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SOD3P08294 240 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PET100P0DJ07 73 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 DPP4P27487 766 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 NOVA1P51513 510 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 OR12D2P58182 307 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 RPS26P62854 115 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SYPL1Q16563 259 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 LRRC69Q6ZNQ3 347 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 Q6ZS52 159 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MORN4Q8NDC4 146 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PLPP5Q8NEB5 264 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 OR10A7Q8NGE5 316 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MFSD8Q8NHS3 518 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 STRADBQ9C0K7 418 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 NELFAQ9H3P2 528 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SRMSQ9H3Y6 488 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TAF9BQ9HBM6 251 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC23A2Q9UGH3 650 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 A0A087WUJ7 227 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CCDC187A0A096LP49 1063 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 A0A1W2PQU0 124 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TAAR5O14804 337 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CTNSO60931 367 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 GCGP01275 180 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 ITGB2P05107 769 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 FCGR3AP08637 254 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PPP2CBP62714 309 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PPP2CAP67775 309 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MRPS11P82912 194 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 GUK1Q16774 197 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MRPL52Q86TS9 123 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF664Q8N3J9 261 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 LKAAEAR1Q8TD35 194 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MRPS18CQ9Y3D5 142 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PUS1Q9Y606 427 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 TSC2P49815 1807 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CCDC163A0A0D9SF12 145 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 A8MXE2 369 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PRAMEF26H0Y7S4 382 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SIAH2O43255 324 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 GPRIN2O60269 458 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 EPHA1P21709 976 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 LPAR6P43657 344 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PNLIPRP1P54315 467 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CSRP2Q16527 193 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PWWP2BQ6NUJ5 590 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 MED27Q6P2C8 311 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SUMF2Q8NBJ7 301 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 RGP1Q92546 391 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 PGLYRP3Q96LB9 341 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 CNTNAP3Q9BZ76 1288 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 NOX4Q9NPH5 578 aa9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 FARSAQ9Y285 508 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC5A10A0PJK1 596 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 RIIAD1A6NNX1 92 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BKO60814 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BJP06899 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 HIST1H2BOP23527 126 aa9.86□□□□□ -0.83
CLSTN3-207ENST00000537408 CD38P28907 300 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms