RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TAS2R20P59543 309 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 ZP1P60852 638 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 PRAMEF20Q5VT98 475 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 FAM198BQ6UWH4 519 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 TEX261Q6UWH6 196 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 SEZ6L2Q6UXD5 910 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 DCXRQ7Z4W1 244 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF436Q9C0F3 470 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-202ENST00000535906 SMOC1Q9H4F8 434 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 B3GNT2Q9NY97 397 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 NXT1Q9UKK6 140 aaKnown RBP11.95□□□□□ -0.5
VPS33B-202ENST00000535906 PTRH2Q9Y3E5 179 aaKnown RBP11.95□□□□□ -0.5
VPS33B-202ENST00000535906 U3KQ87 197 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 A0A1B0GUH1 482 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 A0A1W2PNR3 127 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 CYC1P08574 325 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF823P16415 610 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 BIDP55957 195 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 LPAL2Q16609 132 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 METTL11BQ5VVY1 283 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 NHLRC1Q6VVB1 395 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 NDUFAF7Q7L592 441 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 CATSPERDQ86XM0 798 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 GLB1L2Q8IW92 636 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 ST7LQ8TDW4 575 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 OR10A4Q9H209 315 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 FANCFQ9NPI8 374 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 DIABLOQ9NR28 239 aa11.95□□□□□ -0.5
VPS33B-202ENST00000535906 DOK2O60496 412 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 SRSF10O75494 262 aaKnown RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 DNASE1P24855 282 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 DUSP3P51452 185 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 TRA2AQ13595 282 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 CLPPQ16740 277 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 PCK2Q16822 640 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 C3orf33Q6P1S2 294 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 DNM1P34Q6PK57 102 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 CORO6Q6QEF8 472 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF227Q86WZ6 799 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 ASB5Q8WWX0 329 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 CMKLR1Q99788 373 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 STEAP1Q9UHE8 339 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 RPH3AQ9Y2J0 694 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 A0A1W2PNV4 684 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 ARPC1BO15143 372 aaKnown RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 NOS1APO75052 506 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 GLSO94925 669 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 COX6A1P12074 109 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 CFPP27918 469 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 OR3A3P47888 321 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 P2RY4P51582 365 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 MC2RQ01718 297 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 SLC23A3Q6PIS1 610 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 THRSPQ92748 146 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 NKX3-1Q99801 234 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-202ENST00000535906 HEXA-AS1Q9H8Q6 139 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 EMC9Q9Y3B6 208 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 HS3ST3B1Q9Y662 390 aa11.94□□□□□ -0.5
VPS33B-202ENST00000535906 ARPC4-TTLL3A0A0A6YYG9 625 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF814B7Z6K7 855 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 XRCC3O43542 346 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 ITGA5P08648 1049 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 DCTDP32321 178 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 SELENOPP49908 381 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 SIGLEC14Q08ET2 396 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 LINC00303Q3SY05 128 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-202ENST00000535906 LRFN4Q6PJG9 635 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 Q6ZTK2 550 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 FADS6Q8N9I5 356 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 OR51D1Q8NGF3 324 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 RADILQ96JH8 1075 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 OR5B2Q96R09 309 aa11.93□□□□□ -0.5
VPS33B-202ENST00000535906 UTP23Q9BRU9 249 aaKnown RBP11.93□□□□□ -0.5
VPS33B-202ENST00000535906 MRPL13Q9BYD1 178 aaKnown RBP11.93□□□□□ -0.5
VPS33B-202ENST00000535906 NPDC1Q9NQX5 325 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-202ENST00000535906 TNFRSF10AO00220 468 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 SLC22A5O76082 557 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 AQP8O94778 261 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 SFTPDP35247 375 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 IKZF1Q13422 519 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 GLDNQ6ZMI3 551 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-202ENST00000535906 NLRC3Q7RTR2 1065 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 GPAT4Q86UL3 456 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 OR4K17Q8NGC6 315 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 OR2T35Q8NGX2 323 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 MED30Q96HR3 178 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 ZNF700Q9H0M5 742 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 METTL17Q9H7H0 456 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-202ENST00000535906 G6PC2Q9NQR9 355 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 DHDHQ9UQ10 334 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 R4GMQ9 66 aa11.92□□□□□ -0.5
VPS33B-202ENST00000535906 G3V3Q6 166 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms