RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 MT-ND1P03886 318 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 CST2P09228 141 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 WNT2P09544 360 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 GPX2P18283 190 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 HTR5AP47898 357 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 ZNF133P52736 654 aaPredicted RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 PCBP3P57721 371 aaKnown RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 TAS2R41P59536 307 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 FGF12P61328 243 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 PDCD1Q15116 288 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 ARMC4Q5T2S8 1044 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 FAM205BPQ63HN1 556 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 SLC27A4Q6P1M0 643 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 BLOC1S3Q6QNY0 202 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 Q6ZR03 302 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 KLBQ86Z14 1044 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 OR5AS1Q8N127 324 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 POU5F2Q8N7G0 328 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 CLDN22Q8N7P3 220 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 GPR32P1Q8NGA4 272 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 OR10AD1Q8NGE0 317 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 OR8B3Q8NGG8 313 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 OR4D11Q8NGI4 311 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 MOSPD2Q8NHP6 518 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 PFN4Q8NHR9 129 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 ZNF420Q8TAQ5 688 aaPredicted RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 RAB40AQ8WXH6 277 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 HDAC2Q92769 488 aaKnown RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 CMBLQ96DG6 245 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 SGTBQ96EQ0 304 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 NEIL1Q96FI4 390 aaPredicted RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 MAGEB18Q96M61 343 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 OR8B2Q96RD0 313 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 CITED1Q99966 193 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 RBM4BQ9BQ04 359 aaKnown RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 NUDT16L1Q9BRJ7 211 aaKnown RBP6.73□□□□□ -1.33
CHFR-211ENST00000535897 PCGF1Q9BSM1 259 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 POFUT1Q9H488 388 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 GCM1Q9NP62 436 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 NKIRAS1Q9NYS0 192 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 C1RLQ9NZP8 487 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 CLN8Q9UBY8 286 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 MIOXQ9UGB7 285 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 SH3GLB1Q9Y371 365 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 USH1CQ9Y6N9 552 aa6.73□□□□□ -1.33
CHFR-211ENST00000535897 TRBV5-3A0A0A0MS03 114 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 KIR2DS1A0A191URI9 304 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 IFNL4K9M1U5 179 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 DOK2O60496 412 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 ICMTO60725 284 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 ERLIN1O75477 346 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 NDUFA7O95182 113 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 CYB5R3P00387 301 aaPredicted RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 THRBP10828 461 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 MSR1P21757 451 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 PITPNBP48739 271 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 MTPNP58546 118 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 RELBQ01201 579 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 GUCY1A3Q02108 690 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 PAX2Q02962 417 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 LAPTM4AQ15012 233 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 TAF9Q16594 264 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 AGKQ53H12 422 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 ALG10Q5BKT4 473 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 RUSC1-AS1Q66K80 236 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 HIST2H2BDQ6DRA6 164 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 SLC25A47Q6Q0C1 308 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 EPGNQ6UW88 154 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 ZNF620Q6ZNG0 422 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 RHOUQ7L0Q8 258 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 PATL1Q86TB9 770 aaKnown RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 TSPYL5Q86VY4 417 aaPredicted RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 PTOV1Q86YD1 416 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 FUNDC1Q8IVP5 155 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 SLC30A8Q8IWU4 369 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 MREGQ8N565 214 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 FAM110DQ8TAY7 271 aaPredicted RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 TMEM255BQ8WV15 326 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 NMD3Q96D46 503 aaKnown RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 FAM71F1Q96KD3 344 aaPredicted RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 PRSS27Q9BQR3 290 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 CPPED1Q9BRF8 314 aaPredicted RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 ZNF426Q9BUY5 554 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 TXNIPQ9H3M7 391 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 TCF7L1Q9HCS4 588 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 EMC7Q9NPA0 242 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 NOX4Q9NPH5 578 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 C20orf141Q9NUB4 165 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 ASH2LQ9UBL3 628 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.72□□□□□ -1.33
CHFR-211ENST00000535897 RNF114Q9Y508 228 aa6.72□□□□□ -1.33
CHFR-211ENST00000535897 V9GYY5 206 aaPredicted RBP6.72□□□□□ -1.33
CHFR-211ENST00000535897 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.34
CHFR-211ENST00000535897 SGCEO43556 437 aa6.71□□□□□ -1.34
CHFR-211ENST00000535897 SHOX2O60902 331 aaPredicted RBP6.71□□□□□ -1.34
CHFR-211ENST00000535897 ALX3O95076 343 aa6.71□□□□□ -1.34
CHFR-211ENST00000535897 TSPAN15O95858 294 aa6.71□□□□□ -1.34
CHFR-211ENST00000535897 MELTFP08582 738 aa6.71□□□□□ -1.34
CHFR-211ENST00000535897 IRF2P14316 349 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms