RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SFXN3Q9BWM7 321 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 TSPY26PQ9H489 355 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 MRPS30Q9NP92 439 aaKnown RBP2.57□□□□□ -2
SNHG1-202ENST00000535689 ADAP2Q9NPF8 381 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 EXOSC3Q9NQT5 275 aaKnown RBP2.57□□□□□ -2
SNHG1-202ENST00000535689 CENPMQ9NSP4 180 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 FAM212BQ9NTI7 297 aaPredicted RBP2.57□□□□□ -2
SNHG1-202ENST00000535689 FAIMQ9NVQ4 179 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 CLEC5AQ9NY25 188 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 GHRLQ9UBU3 117 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 FZR1Q9UM11 496 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 BOKQ9UMX3 212 aaPredicted RBP2.57□□□□□ -2
SNHG1-202ENST00000535689 RNF24Q9Y225 148 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 SMAD5-AS1Q9Y6J3 95 aa2.57□□□□□ -2
SNHG1-202ENST00000535689 IGLV3-16A0A075B6K0 115 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 KCNE1BA0A087WTH5 132 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 FAM230AA0A1W2PPH8 454 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 WASHC1A8K0Z3 465 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 KRTAP16-1A8MUX0 517 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 SHISA9B4DS77 424 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 EEF1E1-BLOC1S5C9J1V9 151 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 H0YGG7 62 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 PSMD12O00232 456 aaPredicted RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 EEF1E1O43324 174 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 HCRTR1O43613 425 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 B4GALT2O60909 372 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 NOL3O60936 208 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 RHBDL1O75783 438 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 RCBTB2O95199 551 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 HLA-DQB2P05538 268 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 PIRTP0C851 137 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 BCKDHAP12694 445 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 SLC25A16P16260 332 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 CRYGSP22914 178 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 UCP1P25874 307 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 RPA3P35244 121 aaPredicted RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 CYLC1P35663 651 aaPredicted RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 XCR1P46094 333 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 SLC26A5P58743 744 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 POLR2FP61218 127 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 RPS15AP62244 130 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 DEFA6Q01524 100 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 IL1RL1Q01638 556 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 GABPB1Q06547 395 aaPredicted RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 PRDX1Q06830 199 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 CD300CQ08708 224 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 CD47Q08722 323 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 TMED2Q15363 201 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 LTB4RQ15722 352 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 PPP1R3AQ16821 1122 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 AGKQ53H12 422 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 BEX5Q5H9J7 111 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 NHLRC3Q5JS37 347 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 OR2A2Q6IF42 318 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ENPP6Q6UWR7 440 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 WDR88Q6ZMY6 472 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 RTL4Q6ZR62 310 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 CENPUQ71F23 418 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 KRTAP7-1Q8IUC3 87 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 CCDC36Q8IYA8 594 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ELMOD2Q8IZ81 293 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 CSNK1A1LQ8N752 337 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ZNF540Q8NDQ6 660 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 OR2M7Q8NG81 312 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 OR2L3Q8NG85 312 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 OR4K2Q8NGD2 314 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 OR56B1Q8NGI3 324 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 NEIL3Q8TAT5 605 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ZPLD1Q8TCW7 415 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 P3H4Q92791 437 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 LHX4Q969G2 390 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 PIK3IP1Q96FE7 263 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 C1orf147Q96MC9 270 aaPredicted RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 SLC30A2Q9BRI3 323 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 DPH7Q9BTV6 452 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ANGPTL4Q9BY76 406 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 HES7Q9BYE0 225 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 TTTY12Q9BZ98 90 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 PCBD2Q9H0N5 130 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 GNB4Q9HAV0 340 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 NRN1Q9NPD7 142 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ESM1Q9NQ30 184 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 FAM114A2Q9NRY5 505 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ETNK2Q9NVF9 386 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.56□□□□□ -2
SNHG1-202ENST00000535689 SPATA7Q9P0W8 599 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 FETUBQ9UGM5 382 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 MLXQ9UH92 298 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 MGAT4BQ9UQ53 548 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 MRPS33Q9Y291 106 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 FAM215AQ9Y5M1 114 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 SLC22A7Q9Y694 548 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 BZW2Q9Y6E2 419 aaKnown RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 NCKAP5O14513 1909 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 RAI1Q7Z5J4 1906 aaPredicted RBP2.56□□□□□ -2
SNHG1-202ENST00000535689 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ALPK2Q86TB3 2170 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ROS1P08922 2347 aa2.56□□□□□ -2
SNHG1-202ENST00000535689 ANK2Q01484 3957 aa2.55□□□□□ -2
SNHG1-202ENST00000535689 UQCRHLA0A096LP55 91 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms