RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 RPS6KB2Q9UBS0 482 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 NKX1-2Q9UD57 310 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 DCDC2Q9UHG0 476 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 TMCC3Q9ULS5 477 aa6.77□□□□□ -1.33
CLIP1-206ENST00000535290 CAB39Q9Y376 341 aaPredicted RBP6.77□□□□□ -1.33
CLIP1-206ENST00000535290 HERC2O95714 4834 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 A0A1W2PRX2 142 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 H3BUX3 64 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 OR10H3O60404 316 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 FCN3O75636 299 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ADORA3P0DMS8 318 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 LYL1P12980 280 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 NPY4RP50391 375 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ARHGDIAP52565 204 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 DLX1P56177 255 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 GNG11P61952 73 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ERVK-25P63136 954 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 SLC35A2P78381 396 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 POU4F2Q12837 409 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF181Q2M3W8 571 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ALG10BQ5I7T1 473 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ANXA8L1Q5VT79 327 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 CRIP3Q6Q6R5 217 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 MEPCEQ7L2J0 689 aaKnown RBP6.76□□□□□ -1.33
CLIP1-206ENST00000535290 C10orf107Q8IVU9 208 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 OR5AS1Q8N127 324 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 PNKDQ8N490 385 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 C10orf53Q8N6V4 93 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 NABP1Q96AH0 204 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 HAVCR1Q96D42 359 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 RCC1LQ96I51 464 aaKnown RBP6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ASCL2Q99929 193 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 OR2H1Q9GZK4 316 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 WNT5BQ9H1J7 359 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 MMADHCQ9H3L0 296 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-206ENST00000535290 SIAEQ9HAT2 523 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ELOVL3Q9HB03 270 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 MKS1Q9NXB0 559 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 ERVK-18Q9QC07 812 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 UGT2A1Q9Y4X1 527 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 MAB21L2Q9Y586 359 aa6.76□□□□□ -1.33
CLIP1-206ENST00000535290 A0A087WUV0 522 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-206ENST00000535290 A0A1W2PPM1 405 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 CCDC154A6NI56 674 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 LRRC30A6NM36 301 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 NPFFO15130 113 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 CHST1O43916 411 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 PAHP00439 452 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 GSTM3P21266 225 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 LMO1P25800 156 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 CDKN2CP42773 168 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF84P51523 738 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 EMX2Q04743 252 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 CDONQ4KMG0 1287 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 SPANXN4Q5MJ08 99 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 ARL9Q6T311 187 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 BTN2A1Q7KYR7 527 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 COMTD1Q86VU5 262 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 LSMEM1Q8N8F7 131 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 CCDC63Q8NA47 563 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 OR5J2Q8NH18 312 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 NPRL2Q8WTW4 380 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 MZB1Q8WU39 189 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 SLC38A5Q8WUX1 472 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 C17orf50Q8WW18 174 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 DNAJA4Q8WW22 397 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-206ENST00000535290 TUBGCP3Q96CW5 907 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 EPYCQ99645 322 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 MRPL13Q9BYD1 178 aaKnown RBP6.75□□□□□ -1.33
CLIP1-206ENST00000535290 KCNN2Q9H2S1 579 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 RANBP3Q9H6Z4 567 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-206ENST00000535290 SIRT7Q9NRC8 400 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 INPP5EQ9NRR6 644 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 TAS2R5Q9NYW4 299 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 SLC17A7Q9P2U7 560 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 DNAJB11Q9UBS4 358 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 STARD10Q9Y365 291 aa6.75□□□□□ -1.33
CLIP1-206ENST00000535290 IGKV1D-43A0A0B4J1Z2 117 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 A0A1B0GVI7 797 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 F5H5P2 479 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 EREGO14944 169 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ZSCAN12O43309 604 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 RNF13O43567 381 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ANGPTL7O43827 346 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ZFPL1O95159 310 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 OR6A2O95222 327 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SLC2A10O95528 541 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ABHD16AO95870 558 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 IGHG1P01857 330 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 BCHEP06276 602 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CHRM2P08172 466 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 PF4V1P10720 104 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ETFAP13804 333 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF26P17031 533 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SAA4P35542 130 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SRP9P49458 86 aaKnown RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 MVDP53602 400 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CRISP3P54108 245 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CLRN1P58418 232 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms