RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 SELENOSQ9BQE4 189 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 CNPY3Q9BT09 278 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 SYT11Q9BT88 431 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 ST6GALNAC5Q9BVH7 336 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 MRPL13Q9BYD1 178 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 XKR8Q9H6D3 395 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 LRRC19Q9H756 370 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 CALHM2Q9HA72 323 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 UGT1A8Q9HAW9 530 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNHIT6Q9NWK9 470 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 NUDT4Q9NZJ9 180 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 LAMP5Q9UJQ1 280 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF346Q9UL40 294 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 FZR1Q9UM11 496 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 ARFGEF3Q5TH69 2177 aa3.49□□□□□ -1.85
ECHDC1-223ENST00000534442 VPS13BQ7Z7G8 4022 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 SDHDO14521 159 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ANGPT2O15123 496 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 CFLARO15519 480 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 SRPX2O60687 465 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 OR4F21O95013 312 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ECDO95905 644 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 LHBP01229 141 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ANXA5P08758 320 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 HOXB6P17509 224 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MAGP20916 626 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 PBLDP30039 288 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 SLC26A3P40879 764 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 HERVK_113P63132 956 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ERVK-8P63133 956 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 SRPXP78539 464 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 BSPH1Q075Z2 132 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MS4A18Q3C1V0 323 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 PHYHD1Q5SRE7 291 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ANKRD37Q7Z713 158 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 LUZP1Q86V48 1076 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MUC15Q8N387 334 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 FLVCR1-AS1Q8TAF5 88 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 DLX4Q92988 240 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 STARD4Q96DR4 205 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 LYSMD1Q96S90 227 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 CCDC28BQ9BUN5 200 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF416Q9BWM5 594 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 CHID1Q9BWS9 393 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ERVK-6Q9BXR3 956 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 KAT8Q9H7Z6 458 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MOB1AQ9H8S9 216 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MYOZ1Q9NP98 299 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 CENPMQ9NSP4 180 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 ZDHHC18Q9NUE0 388 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 TAS2R16Q9NYV7 291 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MDFICQ9P1T7 246 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 EIF3KQ9UBQ5 218 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 PURGQ9UJV8 347 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 EMCNQ9ULC0 261 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 COQ4Q9Y3A0 265 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 FBXO7Q9Y3I1 522 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 PKHD1L1Q86WI1 4243 aa3.48□□□□□ -1.85
ECHDC1-223ENST00000534442 MED12LQ86YW9 2145 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 IGLV4-3A0A075B6K6 122 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 A0A0G2JMP0 313 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 A0A0X1KG70 313 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 MGAT4DA6NG13 374 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 OR2AG2A6NM03 316 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SHISA9B4DS77 424 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 UGT1A9O60656 530 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 STAMBPO95630 424 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 KRT8P05787 483 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 GSTA1P08263 222 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 HCKP08631 526 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ANXA4P09525 319 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 CALCBP10092 127 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 CNR1P21554 472 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 UCP1P25874 307 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SHMT2P34897 504 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SAA4P35542 130 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ATP4BP51164 291 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 PLOD1Q02809 727 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SRYQ05066 204 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SLC10A7Q0GE19 358 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 EXOSC2Q13868 293 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 RCAN2Q14206 197 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 HERPUD1Q15011 391 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 EXOC3L2Q2M3D2 409 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 NSUN5P1Q3KNT7 163 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ANKRD55Q3KP44 614 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ANKDD1AQ495B1 522 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SFT2D3Q587I9 215 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 TMEM41BQ5BJD5 291 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ZC2HC1BQ5TFG8 222 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 DMKNQ6E0U4 476 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF613Q6PF04 617 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 TMEM220Q6QAJ8 160 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF562Q6V9R5 426 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 CCDC36Q8IYA8 594 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 BBS5Q8N3I7 341 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 SAMD12Q8N8I0 201 aa3.47□□□□□ -1.85
ECHDC1-223ENST00000534442 ZNF491Q8N8L2 437 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms