RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 RPS6KA3P51812 740 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 ARHGDIAP52565 204 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 SMIM11AP58511 58 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 MVKQ03426 396 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 SCRN3Q0VDG4 424 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 PCGF3Q3KNV8 242 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 GPR139Q6DWJ6 353 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 C1orf94Q6P1W5 598 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 C16orf89Q6UX73 402 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 RINLQ6ZS11 566 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 USP51Q70EK9 711 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 FAM122BQ7Z309 247 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 CLDND2Q8NHS1 167 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 FANK1Q8TC84 345 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 KLF14Q8TD94 323 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 HPS1Q92902 700 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 C4orf45Q96LM5 186 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 ERMAPQ96PL5 475 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 ELOVL3Q9HB03 270 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 NDRG4Q9ULP0 352 aaKnown RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 TMCC3Q9ULS5 477 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 COA3Q9Y2R0 106 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-225ENST00000533704 GRIP1Q9Y3R0 1128 aa8.91□□□□□ -0.98
CAPN1-225ENST00000533704 IGHV1-69-2A0A0G2JMI3 117 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SGCEO43556 437 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 AHCYL1O43865 530 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 TIMM8AO60220 97 aaPredicted RBP8.9□□□□□ -0.98
CAPN1-225ENST00000533704 RP2O75695 350 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 GPANK1O95872 356 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 IGHV1-46P01743 117 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 FABP3P05413 133 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 RRM2P31350 389 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SLC6A6P31641 620 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 CDH15P55291 814 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 TMEM33P57088 247 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SRSF2Q01130 221 aaKnown RBP8.9□□□□□ -0.98
CAPN1-225ENST00000533704 TEKQ02763 1124 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SMARCD3Q6STE5 483 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 ARL9Q6T311 187 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 CYP2R1Q6VVX0 501 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 DPY19L2P2Q6ZN68 376 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 PTCHD4Q6ZW05 846 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 PIGWQ7Z7B1 504 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 ADCK1Q86TW2 530 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 JAZF1Q86VZ6 243 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 GLB1L2Q8IW92 636 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SLC7A6Q92536 515 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 MARS2Q96GW9 593 aaKnown RBP8.9□□□□□ -0.98
CAPN1-225ENST00000533704 DHRS1Q96LJ7 313 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 GPA33Q99795 319 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 IFT27Q9BW83 186 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 NUAK2Q9H093 628 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 SAP30LQ9HAJ7 183 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 NRIP3Q9NQ35 241 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 NDE1Q9NXR1 346 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 PLEK2Q9NYT0 353 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 ASH2LQ9UBL3 628 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 CD300AQ9UGN4 299 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 TMEFF2Q9UIK5 374 aaPredicted RBP8.9□□□□□ -0.98
CAPN1-225ENST00000533704 CACNG2Q9Y698 323 aa8.9□□□□□ -0.98
CAPN1-225ENST00000533704 ZSCAN5BA6NJL1 495 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 B2RBV5 119 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 B4DSR2 109 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 FAM157AC9JC47 383 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 SEMG1P04279 462 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 GSTM3P21266 225 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 CDKN2AP42771 156 aaKnown RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 FXYD6P3P58550 94 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 MRPS11P82912 194 aaKnown RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 DBPQ10586 325 aaPredicted RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 AQP6Q13520 282 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 MEP1BQ16820 701 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 HFEQ30201 348 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 TMEM255AQ5JRV8 349 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 LEG1Q6P5S2 330 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 DNM1P34Q6PK57 102 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 VASH1Q7L8A9 365 aaPredicted RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 ZER1Q7Z7L7 766 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 GLCCI1Q86VQ1 547 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 ZDHHC21Q8IVQ6 265 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 OR4K13Q8NH42 304 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 CCL17Q92583 94 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 ELMOD3Q96FG2 381 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 SAMD8Q96LT4 415 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 TSSK2Q96PF2 358 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 GPX7Q96SL4 187 aaPredicted RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 EGLN1Q9GZT9 426 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 OR52D1Q9H346 318 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 POFUT1Q9H488 388 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 MSL2Q9HCI7 577 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 NKIRAS2Q9NYR9 191 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 VSX1Q9NZR4 365 aaPredicted RBP8.89□□□□□ -0.99
CAPN1-225ENST00000533704 STAB1Q9NY15 2570 aa8.89□□□□□ -0.99
CAPN1-225ENST00000533704 FBN1P35555 2871 aaKnown RBP8.88□□□□□ -0.99
CAPN1-225ENST00000533704 ISPDA4D126 451 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 CLDN25C9JDP6 229 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 RENP00797 406 aa8.88□□□□□ -0.99
CAPN1-225ENST00000533704 HLA-DQA2P01906 255 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms