RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 OR2AJ1Q8NGZ0 328 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 TMEM163Q8TC26 289 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 FBXW5Q969U6 566 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 GRIP2Q9C0E4 1043 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 LIME1Q9H400 295 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 TOR3AQ9H497 397 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 C8orf4Q9NR00 106 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 PLEK2Q9NYT0 353 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 COMMD3-BMI1R4GMX3 469 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 CSMD2Q7Z408 3487 aa12.63□□□□□ -0.39
SF3B2-214ENST00000533595 E7EQL1 145 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 CASQ2O14958 399 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-214ENST00000533595 RER1O15258 196 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 DOK2O60496 412 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 SNAP29O95721 258 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 GSTT1P30711 240 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 GGT2P36268 569 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 CDC42P60953 191 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 RPS7P62081 194 aaKnown RBP12.62□□□□□ -0.39
SF3B2-214ENST00000533595 GALK2Q01415 458 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 HGFACQ04756 655 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 SLC35D3Q5M8T2 416 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 CORO6Q6QEF8 472 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 PAMR1Q6UXH9 720 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 B3GLCTQ6Y288 498 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 C20orf204Q6ZNR8 217 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 GALNT4Q8N4A0 578 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 PACRGLQ8N7B6 248 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 HRASLS5Q96KN8 279 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 IL4I1Q96RQ9 567 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 MBOAT4Q96T53 435 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 WDR76Q9H967 626 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 NKX1-2Q9UD57 310 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-214ENST00000533595 CYB5R1Q9UHQ9 305 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 SPEF1Q9Y4P9 236 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 PDZD2O15018 2839 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 TEX15Q9BXT5 2789 aa12.62□□□□□ -0.39
SF3B2-214ENST00000533595 RAI1Q7Z5J4 1906 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 C5orf49A4QMS7 147 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 TMCC2O75069 709 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 COX5BP10606 129 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 CCL2P13500 99 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 CCNOP22674 350 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 SLC2A5P22732 501 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 NR4A1P22736 598 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 HTR5AP47898 357 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 ENTPD1P49961 510 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 HIST1H3AP68431 136 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 SLC34A1Q06495 639 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 APOFQ13790 326 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 RAB35Q15286 201 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 CCDC92Q53HC0 331 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 HIST2H3PS2Q5TEC6 136 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 SLC18B1Q6NT16 456 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 HIST2H3AQ71DI3 136 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 VASH1Q7L8A9 365 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 ERI1Q8IV48 349 aaKnown RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 NUP37Q8NFH4 326 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 OR8J1Q8NGP2 316 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 FAM81AQ8TBF8 368 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 SMAP2Q8WU79 429 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 ZMYND19Q96E35 227 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 POM121L2Q96KW2 1035 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 DHRS9Q9BPW9 319 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 RNPEPL1Q9HAU8 725 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 FAIMQ9NVQ4 179 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 IMPAD1Q9NX62 359 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 SMPD3Q9NY59 655 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 H2AFY2Q9P0M6 372 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 ATPIF1Q9UII2 106 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 ST6GALNAC2Q9UJ37 374 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 NDRG4Q9ULP0 352 aaKnown RBP12.61□□□□□ -0.39
SF3B2-214ENST00000533595 DSCAMO60469 2012 aa12.61□□□□□ -0.39
SF3B2-214ENST00000533595 CCDC168Q8NDH2 2452 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 LOC100509620A0A075B734 347 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 E9PQ18 207 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 ZNF593O00488 134 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-214ENST00000533595 SYNGR3O43761 229 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 RAF1P04049 648 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 SPARCP09486 303 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 RPS27P42677 84 aaKnown RBP12.6□□□□□ -0.39
SF3B2-214ENST00000533595 FABP6P51161 128 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 NKX6-1P78426 367 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-214ENST00000533595 SNTB2Q13425 540 aaKnown RBP12.6□□□□□ -0.39
SF3B2-214ENST00000533595 KEAP1Q14145 624 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 PCK2Q16822 640 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 LCN1P1Q5VSP4 162 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 NXNL2Q5VZ03 156 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 KRT80Q6KB66 452 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 CDH24Q86UP0 819 aa12.6□□□□□ -0.39
SF3B2-214ENST00000533595 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms