RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PELI1Q96FA3 418 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 DDOQ99489 341 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 JAM3Q9BX67 310 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 SLCO1C1Q9NYB5 712 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 GLTPQ9NZD2 209 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 EXOGQ9Y2C4 368 aaKnown RBP13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 PLPP2O43688 288 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 S100A11P31949 105 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 KIR2DL3P43628 341 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 OR51E1Q8TCB6 317 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 SPAG17Q6Q759 2223 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 SLC33A1O00400 549 aaPredicted RBP13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 GABRB1P18505 474 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 MECP2P51608 486 aaKnown RBP13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 OTPQ5XKR4 325 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 CNEP1R1Q8N9A8 125 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 PSMF1Q92530 271 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
PCDHA3-202ENST00000532566 EML2O95834 649 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 C1QCP02747 245 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 SPNP16150 400 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ABCD3P28288 659 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 S100A2P29034 98 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 AKR1C8PQ5T2L2 129 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 OR1S1Q8NH92 325 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 SMIM4Q8WVI0 70 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 IL1F10Q8WWZ1 152 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 FER1L6-AS2Q96M78 137 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 CNTNAP3BQ96NU0 1288 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 CALHM2Q9HA72 323 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 R4GMQ9 66 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 PSME4Q14997 1843 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ARID1AO14497 2285 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 SLC34A2O95436 690 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 SIX6O95475 246 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 SLC25A1P53007 311 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 CKAP5Q14008 2032 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 TIGD3Q6B0B8 471 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 RNF128Q8TEB7 428 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ABHD6Q9BV23 337 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 UNKLQ9H9P5 680 aaKnown RBP13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 HRASLSQ9HDD0 168 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 PCOLCE2Q9UKZ9 415 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 FAM186AA6NE01 2351 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 LCTP09848 1927 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 IGHV1OR15-9A0A0B4J2B8 117 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ZNF814B7Z6K7 855 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 SGCEO43556 437 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ITGB2P05107 769 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 EPHA1P21709 976 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ZNF141Q15928 474 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 GLYATL2Q8WU03 294 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 MICU1Q9BPX6 476 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 IGHV1OR21-1A0A087WYE8 117 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 TMEM235A6NFC5 223 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 FOXF1Q12946 379 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 UBALD2Q8IYN6 164 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 FAM71CQ8NEG0 241 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 PCNPQ8WW12 178 aaKnown RBP13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 VN1R1Q9GZP7 353 aa13.88□□□□□ -0.19
PCDHA3-202ENST00000532566 ZNF780AO75290 641 aaPredicted RBP13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 IFNA1P01562 189 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 GZMKP49863 264 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 C2orf76Q3KRA6 126 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 YRDCQ86U90 279 aaKnown RBP13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 CCDC74BQ96LY2 380 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 BANF2Q9H503 90 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 AUNIPQ9H7T9 357 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 PIGLQ9Y2B2 252 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 ZNF587BE7ETH6 402 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 ZNF117Q03924 483 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 LILRB2Q8N423 598 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 OXGR1Q96P68 337 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 SMIM3Q9BZL3 60 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 C1orf123Q9NWV4 160 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 HRH3Q9Y5N1 445 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 A0A0A6YYJ9 748 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 MCRIP1C9JLW8 97 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 AGPAT2O15120 278 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 PMP2P02689 132 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 GIPP09681 153 aaPredicted RBP13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 SLC51BQ86UW2 128 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 OTOSQ8NHW6 89 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 PAQR8Q8TEZ7 354 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 OR8B4Q96RC9 309 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 CCDC88CQ9P219 2028 aa13.87□□□□□ -0.19
PCDHA3-202ENST00000532566 TNFSF14O43557 240 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 IRF2P14316 349 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 NAXDQ8IW45 347 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 GABRG1Q8N1C3 465 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 OR1L3Q8NH93 324 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 LIPHQ8WWY8 451 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 ZNF681Q96N22 645 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 SULT4A1Q9BR01 284 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 ADGRL4Q9HBW9 690 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 OR6C68A6NDL8 312 aa13.86□□□□□ -0.19
PCDHA3-202ENST00000532566 TMEM200CA6NKL6 621 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms