RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 YIPF7Q8N8F6 280 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 OR52N5Q8NH56 324 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 RAB2BQ8WUD1 216 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 ASB17Q8WXJ9 295 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 APH1AQ96BI3 265 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 SH3GL3Q99963 347 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 CHCHD6Q9BRQ6 235 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 CENPOQ9BU64 300 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 NELFAQ9H3P2 528 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 TRIM36Q9NQ86 728 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 TMEM38BQ9NVV0 291 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 ASH2LQ9UBL3 628 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 GDF2Q9UK05 429 aaPredicted RBP19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 FAM215AQ9Y5M1 114 aa19.3■□□□□ 0.68
PACSIN3-209ENST00000532457 ZGRF1Q86YA3 2104 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 DOCK7Q96N67 2140 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 FIGNL2A6NMB9 653 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 PHYHO14832 338 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 RER1O15258 196 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 AIREO43918 545 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 TOXO94900 526 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 MSR1P21757 451 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF84P51523 738 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 GBX2P52951 348 aaPredicted RBP19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 FOXF2Q12947 444 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 INSL4Q14641 139 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 DMKNQ6E0U4 476 aaPredicted RBP19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 KCTD20Q7Z5Y7 419 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF100Q8IYN0 542 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF679Q8IYX0 411 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 TTYH2Q9BSA4 534 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 B3GAT2Q9NPZ5 323 aa19.29■□□□□ 0.68
PACSIN3-209ENST00000532457 ZNF462Q96JM2 2506 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 CD8B2A6NJW9 211 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 WDR1O75083 606 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 KRT8P05787 483 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 GABRA1P14867 456 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 KIR2DL2P43627 348 aaPredicted RBP19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 LSM6P62312 80 aaKnown RBP19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 C9orf135Q5VTT2 229 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 ARL9Q6T311 187 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 C3P1Q6ZMU1 363 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 CD163Q86VB7 1156 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 FBXO17Q96EF6 278 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 ARHGAP21Q5T5U3 1957 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 LOC100506127A0A0U1RQW1 187 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 RPL36A-HNRNPH2H7BZ11 118 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 DVL2O14641 736 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 PLPP2O43688 288 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 TMCC2O75069 709 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 KRT33AO76009 404 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 HOXD4P09016 255 aaPredicted RBP19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 PTGER4P35408 488 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 FABP5Q01469 135 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 SLC3A1Q07837 685 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 IGFBP7Q16270 282 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 FAM27BQ5VT28 67 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 RNF133Q8WVZ7 376 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 PGLYRP3Q96LB9 341 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 FOXB1Q99853 325 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 TMED9Q9BVK6 235 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 TP63Q9H3D4 680 aaPredicted RBP19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 SIAEQ9HAT2 523 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 PNRC2Q9NPJ4 139 aaKnown RBP19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 GLRX2Q9NS18 164 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 FBXL3Q9UKT7 428 aa19.28■□□□□ 0.68
PACSIN3-209ENST00000532457 NBASA2RRP1 2371 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 A0A1W2PPW3 197 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 PNPP00491 289 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 TACSTD2P09758 323 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 B4GALT1P15291 398 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 OPRL1P41146 370 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 ARF1P84077 181 aaKnown RBP19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 FAPQ12884 760 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 GPR50Q13585 617 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 FAM214BQ7L5A3 538 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 KRT77Q7Z794 578 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 FGFBP3Q8TAT2 258 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 PPP1R14AQ96A00 147 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 SLAMF6Q96DU3 332 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 MRPL48Q96GC5 212 aaKnown RBP19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 CENPMQ9NSP4 180 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 FRRS1LQ9P0K9 344 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 LRP12Q9Y561 859 aa19.27■□□□□ 0.68
PACSIN3-209ENST00000532457 PATE4P0C8F1 98 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 GUCA1AP43080 201 aaPredicted RBP19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 OR3A2P47893 321 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 MRPL49Q13405 166 aaKnown RBP19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 CDK5R1Q15078 307 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 OR7E24Q6IFN5 339 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 RPL22L1Q6P5R6 122 aaKnown RBP19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 KCTD18Q6PI47 426 aaPredicted RBP19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 EGFL6Q8IUX8 553 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 NDNFQ8TB73 568 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 RPS4Y2Q8TD47 263 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 GHSRQ92847 366 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 MROQ9BYG7 248 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 C1orf198Q9H425 327 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 STUB1Q9UNE7 303 aa19.26■□□□□ 0.67
PACSIN3-209ENST00000532457 POLR1DQ9Y2S0 133 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms