RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 HSPG2P98160 4391 aa2.9□□□□□ -1.95
CD44-235ENST00000532339 ARHGAP21Q5T5U3 1957 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 A0A1W2PQ67 120 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 MFSD2BA6NFX1 497 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 FRG2CA6NGY1 282 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 FAM166BA8MTA8 275 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 FOXI3A8MTJ6 420 aaPredicted RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 KMOO15229 486 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 KDELR3O43731 214 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 GMFGO60234 142 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 IGHV3-9P01782 118 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 OPN1MWP04001 364 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 WNT2P09544 360 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 SLC35E2P0CK97 266 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 OPN1MW2P0DN77 364 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 OPN1MW3P0DN78 364 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 FOLR2P14207 255 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 ZNF7P17097 686 aaPredicted RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 SPRP35270 261 aaPredicted RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 OR1D4P47884 311 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 HLCSP50747 726 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 SLC7A2P52569 658 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 GBX2P52951 348 aaPredicted RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 MFAP2P55001 183 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 PLGLB1Q02325 96 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 BCL2L1Q07817 233 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 CHIT1Q13231 466 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 EIF2B1Q14232 305 aaKnown RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 PDK4Q16654 411 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 C17orf58Q2M2W7 97 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 DEFB110Q30KQ9 67 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 C9orf66Q5T8R8 295 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 FAM219BQ5XKK7 198 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 TMEM205Q6UW68 189 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 APOOLQ6UXV4 268 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 M1APQ8TC57 530 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 FNDC8Q8TC99 324 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.89□□□□□ -1.95
CD44-235ENST00000532339 DHTKD1Q96HY7 919 aaPredicted RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 SLC6A7Q99884 636 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 CHCHD5Q9BSY4 110 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 ALG12Q9BV10 488 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 ZYG11BQ9C0D3 744 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 SLC25A51Q9H1U9 297 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 CUTCQ9NTM9 273 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 IMP3Q9NV31 184 aaKnown RBP2.89□□□□□ -1.95
CD44-235ENST00000532339 EXTL2Q9UBQ6 330 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 CD84Q9UIB8 345 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 SNX6Q9UNH7 406 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 PPIAL4AQ9Y536 164 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 WIF1Q9Y5W5 379 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 DOCK4Q8N1I0 1966 aa2.89□□□□□ -1.95
CD44-235ENST00000532339 MUC2Q02817 5179 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 IGHV3OR16-12A0A075B7B8 117 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 SYNJ2BP-COX16A0A087WUM0 186 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 TRGV5A0A0B4J1U4 118 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 PPIAL4CA0A0B4J2A2 164 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 GOLGA6L10A6NI86 522 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 RPL37AP8A6NKH3 93 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 PPIAL4DF5H284 164 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 GOLGA6L19H0YKK7 550 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 GLSO94925 669 aaPredicted RBP2.88□□□□□ -1.95
CD44-235ENST00000532339 ANP32DO95626 131 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CD8AP01732 235 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 OPN1LWP04000 364 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 PPIAL4GP0DN37 164 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 ANXA3P12429 323 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CPN1P15169 458 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 RPA2P15927 270 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 ATP6V1C1P21283 382 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 UGT2B10P36537 528 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CD79BP40259 229 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 MAGEA5P43359 124 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CSNK1DP48730 415 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CASP4P49662 377 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CD300CQ08708 224 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 RAB35Q15286 201 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CAMK4Q16566 473 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 PGGHGQ32M88 737 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 CYBRD1Q53TN4 286 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 FAM182AQ5T1J6 154 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 ATAD3BQ5T9A4 648 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 PYHIN1Q6K0P9 492 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 PRMT9Q6P2P2 845 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 EMBQ6PCB8 327 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 REG3GQ6UW15 175 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 UGT2A3Q6UWM9 527 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 BTNL3Q6UXE8 466 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 SYT10Q6XYQ8 523 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 ZNF550Q7Z398 422 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 SLC25A42Q86VD7 318 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 RPS19BP1Q86WX3 136 aaKnown RBP2.88□□□□□ -1.95
CD44-235ENST00000532339 BPIFB2Q8N4F0 458 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 TMEM251Q8N6I4 163 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 STEAP2Q8NFT2 490 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 OR4E2Q8NGC2 313 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 OR4Q3Q8NH05 313 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 KCTD4Q8WVF5 259 aa2.88□□□□□ -1.95
CD44-235ENST00000532339 ASZ1Q8WWH4 475 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms