RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ANKRD16Q6P6B7 361 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 BCDIN3DQ7Z5W3 292 aaKnown RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 KLHDC8BQ8IXV7 354 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 TMEM185AQ8NFB2 350 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 RND1Q92730 232 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 CNRIP1Q96F85 164 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 OR2A5Q96R48 311 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 NMNAT2Q9BZQ4 307 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 EMC7Q9NPA0 242 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 PRDM7Q9NQW5 492 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 PIGLQ9Y2B2 252 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 A0A1W2PPV4 95 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 EDDM3AQ14507 147 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF547Q8IVP9 402 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 DMBX1Q8NFW5 382 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 POC1BQ8TC44 478 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 STK35Q8TDR2 534 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 OR5M11Q96RB7 305 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 UFSP2Q9NUQ7 469 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 B4E171 279 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 ATP1B1P05026 303 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 UBBP0CG47 229 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 GDNFP39905 211 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 TSPAN7P41732 249 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 MFGE8Q08431 387 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 CSRP2Q16527 193 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 RGS7BPQ6MZT1 257 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 FAM96BQ9Y3D0 163 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 TRDV1A0A1B0GX56 115 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 H7C1Q1 480 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 UBL3O95164 117 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 GSTP1P09211 210 aaKnown RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 TATDN3Q17R31 274 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 SEMA6DQ8NFY4 1073 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 OR6M1Q8NGM8 313 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 OR13F1Q8NGS4 319 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 SMIM3Q9BZL3 60 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 TRABD2BA6NFA1 517 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 A8MXE2 369 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 FCMRO60667 390 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 S100A7P31151 101 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 USF2Q15853 346 aaPredicted RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ACKR1Q16570 336 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 GCNT2Q8N0V5 402 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 GIMAP1Q8WWP7 306 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 EMG1Q92979 244 aaKnown RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 GNRHR2Q96P88 292 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 PSD2Q9BQI7 771 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 BARHL1Q9BZE3 327 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ESRP2Q9H6T0 727 aaKnown RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ACER3Q9NUN7 267 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 C1orf123Q9NWV4 160 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 RAB22AQ9UL26 194 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 RGS11O94810 467 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 LAX1Q8IWV1 398 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 BEST4Q8NFU0 473 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ZCCHC14Q8WYQ9 949 aaKnown RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ABCD4O14678 606 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 TNFSF12O43508 249 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 TMIGD3P0DMS9 266 aaPredicted RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 FCARP24071 287 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 EMDP50402 254 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 RAP2BP61225 183 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF529Q6P280 563 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 SYT9Q86SS6 491 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 C17orf50Q8WW18 174 aa10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF486Q96H40 463 aaPredicted RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF346Q9UL40 294 aaKnown RBP10.25□□□□□ -0.77
PTPRK-221ENST00000532331 LOC100289279A0A1B0GTE1 492 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ATXN7O15265 892 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SPINT2O43291 252 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 TFAP2AP05549 437 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 PSMB1P20618 241 aaKnown RBP10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF92Q03936 586 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 EMC4Q5J8M3 183 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SFRP5Q5T4F7 317 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ANKRD34AQ69YU3 496 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ADGRE4PQ86SQ3 457 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 NUDT8Q8WV74 236 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 PIGTQ969N2 578 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 FAM3DQ96BQ1 224 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 UBL7Q96S82 380 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SLCO5A1Q9H2Y9 848 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 OSGIN1Q9UJX0 560 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 CD160O95971 181 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 MC2RQ01718 297 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SPINK14Q6IE38 97 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 LYPD8Q6UX82 237 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 SECTM1Q8WVN6 248 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 MALSU1Q96EH3 234 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 TSSK2Q96PF2 358 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 TEAD3Q99594 435 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 FAM60AQ9NP50 221 aa10.24□□□□□ -0.77
PTPRK-221ENST00000532331 GPR55Q9Y2T6 319 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF732B4DXR9 585 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms