RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NCBP2P52298 156 aaKnown RBP eCLIP5.67□□□□□ -1.5
CSDE1-213ENST00000530784 PSMD4P55036 377 aaKnown RBP5.67□□□□□ -1.5
CSDE1-213ENST00000530784 CLDN15P56746 228 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 LCP2Q13094 533 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 ZNHIT3Q15649 155 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-213ENST00000530784 SGCBQ16585 318 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 EXOC3L2Q2M3D2 409 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 BEX5Q5H9J7 111 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 SLC35D3Q5M8T2 416 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF678Q5SXM1 525 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 TMEM107Q6UX40 140 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 LRRTM1Q86UE6 522 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 MMD2Q8IY49 270 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 OR5M1Q8NGP8 315 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 OR6K3Q8NGY3 331 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 C16orf78Q8WTQ4 265 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 ROBO4Q8WZ75 1007 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF486Q96H40 463 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-213ENST00000530784 TMEM237Q96Q45 408 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 PRRG4Q9BZD6 226 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 TBL1XR1Q9BZK7 514 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 CDC42EP4Q9H3Q1 356 aaKnown RBP5.67□□□□□ -1.5
CSDE1-213ENST00000530784 FANCFQ9NPI8 374 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 MIEF1Q9NQG6 463 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 MED11Q9P086 117 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF337Q9Y3M9 751 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 CCL27Q9Y4X3 112 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 AP4B1Q9Y6B7 739 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 DNAJC13O75165 2243 aa5.67□□□□□ -1.5
CSDE1-213ENST00000530784 EXPH5Q8NEV8 1989 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 A0A087WUV0 522 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 UPK1AO00322 258 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 SPRY1O43609 319 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 GMFGO60234 142 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 FADS1O60427 444 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 SS18L1O75177 396 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 AQP8O94778 261 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 PSMG1O95456 288 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 ANGPTL1O95841 491 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 SNRPAP09012 282 aaKnown RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF17P17021 662 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 LOXP28300 417 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 NTSP30990 170 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 PKNOX1P55347 436 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 CTBP2P56545 445 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF763Q0D2J5 394 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 C17orf67Q0P5P2 114 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 C2orf80Q0P641 193 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 GUSBP1Q15486 140 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 GLYR1Q49A26 553 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 UNC50Q53HI1 259 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 LGSNQ5TDP6 509 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 SYT10Q6XYQ8 523 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 MARCH3Q86UD3 253 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 LCA5Q86VQ0 697 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 OR2L13Q8N349 312 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 DCAKDQ8WVC6 231 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 KCNA7Q96RP8 456 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 FMO2Q99518 471 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 TSPYL1Q9H0U9 437 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 C3orf14Q9HBI5 128 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 CDH20Q9HBT6 801 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 PAQR5Q9NXK6 330 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 TMEM216Q9P0N5 145 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 MCTS1Q9ULC4 181 aaKnown RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 CLEC4AQ9UMR7 237 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 TIMM22Q9Y584 194 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 NAV3Q8IVL0 2385 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF469Q96JG9 3925 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-213ENST00000530784 DNHD1Q96M86 4753 aa5.66□□□□□ -1.5
CSDE1-213ENST00000530784 PCNX3Q9H6A9 2034 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 A0A087WZY1 265 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 IGLV3-32A0A0A0MS00 114 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 EXOC1LA0A1B0GW35 172 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 UTS2O95399 124 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 SYNGR4O95473 234 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 IRF2P14316 349 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 IMPDH1P20839 514 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 ACHEP22303 614 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 SLC6A8P48029 635 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 ATP5J2P56134 94 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 RPS4XP62701 263 aaKnown RBP5.65□□□□□ -1.5
CSDE1-213ENST00000530784 IMPG1Q17R60 797 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 VPS26BQ4G0F5 336 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 STAC2Q6ZMT1 411 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 SLC22A9Q8IVM8 553 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 LYG1Q8N1E2 194 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 MMGT1Q8N4V1 131 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 OR10D3Q8NH80 312 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF519Q8TB69 540 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 GPR151Q8TDV0 419 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 IFT81Q8WYA0 676 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 L3HYPDHQ96EM0 354 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 C11orf24Q96F05 449 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-213ENST00000530784 AMDHD1Q96NU7 426 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 ACTR6Q9GZN1 396 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 OR10A4Q9H209 315 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 GLIPR2Q9H4G4 154 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 MID1IP1Q9NPA3 183 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 GLRX2Q9NS18 164 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms