RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FBXO25Q8TCJ0 367 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF675Q8TD23 568 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 HGDQ93099 445 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 C11orf52Q96A22 123 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 PPWD1Q96BP3 646 aaKnown RBP3.85□□□□□ -1.79
CSDE1-212ENST00000529046 RILPQ96NA2 401 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 ATP6V0BQ99437 205 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 PKP2Q99959 881 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 RBM4BQ9BQ04 359 aaKnown RBP3.85□□□□□ -1.79
CSDE1-212ENST00000529046 ERVK-6Q9BXR3 956 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 RAB17Q9H0T7 212 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 STMN4Q9H169 189 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-212ENST00000529046 EXO5Q9H790 373 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 MID1IP1Q9NPA3 183 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 NMRK1Q9NWW6 199 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 PRODH2Q9UF12 536 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 ERVK-19Q9WJR5 959 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 ITPR3Q14573 2671 aa3.85□□□□□ -1.79
CSDE1-212ENST00000529046 C15orf38-AP3S2A0A0A6YYH1 394 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 A0A1W2PPR1 153 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 FRG2CA6NGY1 282 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SUPT3HB4E1H0 165 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 G3V3Y1 287 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SAP18O00422 153 aaKnown RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 OR7A17O14581 309 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 RAD51CO43502 376 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 ICOSLGO75144 302 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SEC22BO75396 215 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SUPT3HO75486 399 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 PIAS1O75925 651 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 OTCP00480 354 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 MT-ND2P03891 347 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 CT62P0C5K7 136 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GFAPP14136 432 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SELEP16581 610 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 CSNK2A2P19784 350 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GPX3P22352 226 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 PHBP35232 272 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GCKP35557 465 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 PTGDSP41222 190 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 NPBWR1P48145 328 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 EMDP50402 254 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SERPINB8P50452 374 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SERPINB9P50453 376 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 XKP51811 444 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 DIO3P55073 304 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 NAA20P61599 178 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 IFT88Q13099 833 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 CBX3Q13185 183 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GLYR1Q49A26 553 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GLIPR1L2Q4G1C9 344 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 PRAMEF20Q5VT98 475 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 OR2A2Q6IF42 318 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 PODNL1Q6PEZ8 512 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GOLGA7Q7Z5G4 137 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 CMC1Q7Z7K0 106 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 LRRTM1Q86UE6 522 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 PLCZ1Q86YW0 608 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 CTAGE3PQ8IX95 158 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF440Q8IYI8 595 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 FAM83FQ8NEG4 500 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 C11orf45Q8TAV5 145 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 KCTD4Q8WVF5 259 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 UCN3Q969E3 161 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 TM4SF18Q96CE8 201 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 C11orf24Q96F05 449 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 C18orf12Q96KH6 178 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF681Q96N22 645 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 NEDD4LQ96PU5 975 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 GAL3ST4Q96RP7 486 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 FAIM2Q9BWQ8 316 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 UGT2B28Q9BY64 529 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 NXF5Q9H1B4 397 aaKnown RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SRD5A3Q9H8P0 318 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 TEX10Q9NXF1 929 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-212ENST00000529046 TAS2R7Q9NYW3 318 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 MAT2BQ9NZL9 334 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 CLCF1Q9UBD9 225 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 SNX6Q9UNH7 406 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 RNF11Q9Y3C5 154 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF407Q9C0G0 2248 aa3.84□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF469Q96JG9 3925 aaPredicted RBP3.84□□□□□ -1.8
CSDE1-212ENST00000529046 MAP1AP78559 2803 aaPredicted RBP3.84□□□□□ -1.8
CSDE1-212ENST00000529046 DNAJC13O75165 2243 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 SPG11Q96JI7 2443 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 MTORP42345 2549 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 hCG_38984A0A1B0GV85 526 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 WASHC1A8K0Z3 465 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 H3BQF6 201 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 CTDSPLO15194 276 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 MLNRO43193 412 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TXNL1O43396 289 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TSPAN2O60636 221 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TRAPPC6AO75865 159 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TNFSF13O75888 250 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 PNPP00491 289 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 KLK1P06870 262 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 RPS17P08708 135 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms