RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 RIBC1Q8N443 379 aaPredicted RBP2.68□□□□□ -1.98
CD44-229ENST00000528672 DHRSXQ8N5I4 330 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 ZNF491Q8N8L2 437 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 SUMF1Q8NBK3 374 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 MFSD9Q8NBP5 474 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 AQP11Q8NBQ7 271 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 OR51G2Q8NGK0 314 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 OR1L4Q8NGR5 311 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 OR2L2Q8NH16 312 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 NUBPLQ8TB37 319 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 MAGEE2Q8TD90 523 aaPredicted RBP2.68□□□□□ -1.98
CD44-229ENST00000528672 SSC4DQ8WTU2 575 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 PYROXD1Q8WU10 500 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 IL1F10Q8WWZ1 152 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 BADQ92934 168 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 C10orf35Q96D05 121 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 FAHD2AQ96GK7 314 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 QKIQ96PU8 341 aaKnown RBP eCLIP2.68□□□□□ -1.98
CD44-229ENST00000528672 SLC38A2Q96QD8 506 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 RNF2Q99496 336 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 LITAFQ99732 161 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 NAPGQ99747 312 aaPredicted RBP2.68□□□□□ -1.98
CD44-229ENST00000528672 C20orf24Q9BUV8 137 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 TMEM109Q9BVC6 243 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 KIFC1Q9BW19 673 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 SIAEQ9HAT2 523 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 HRASLSQ9HDD0 168 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 DYRK4Q9NR20 520 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 VNN3Q9NY84 501 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 USE1Q9NZ43 259 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 CCDC59Q9P031 241 aaKnown RBP2.68□□□□□ -1.98
CD44-229ENST00000528672 THAP10Q9P2Z0 257 aaPredicted RBP2.68□□□□□ -1.98
CD44-229ENST00000528672 MLXQ9UH92 298 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 RWDD2AQ9UIY3 292 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 FLVCR2Q9UPI3 526 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 POLDIP2Q9Y2S7 368 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 GOLT1BQ9Y3E0 138 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 OARD1Q9Y530 152 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 CSDC2Q9Y534 153 aaKnown RBP2.68□□□□□ -1.98
CD44-229ENST00000528672 ASB4Q9Y574 426 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 TIMM10BQ9Y5J6 103 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 OR51B4Q9Y5P0 310 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 KIAA0232Q92628 1395 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 ATP10AO60312 1499 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 ZNF518AQ6AHZ1 1483 aa2.68□□□□□ -1.98
CD44-229ENST00000528672 PBRM1Q86U86 1689 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 CACNA1AO00555 2505 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 UHRF1BP1LA0JNW5 1464 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 PRSS37A4D1T9 235 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 VSTM2BA6NLU5 285 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 TMX2-CTNND1H3BSU7 103 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 RFXANKO14593 260 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 GOSR2O14653 212 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 PRMT5O14744 637 aaPredicted RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 TAPBPO15533 448 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 LINC01565O15544 149 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 CHP2O43745 196 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 SNAP91O60641 907 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 UGT1A9O60656 530 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 CCDC22O60826 627 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 ZFAND5O76080 213 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 SRP72O76094 671 aaKnown RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 CTDNEP1O95476 244 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 SERPINA1P01009 418 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 FGGP02679 453 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 IFNA4P05014 189 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 PCCAP05165 728 aaPredicted RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 CD5P06127 495 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 CDK1P06493 297 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 SMIM6P0DI80 62 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 PVRP15151 417 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 PGAM1P18669 254 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 HMGB2P26583 209 aaKnown RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 STOMP27105 288 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 ERP29P30040 261 aaKnown RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 CCR7P32248 378 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 ARR3P36575 388 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 ACVR1BP36896 505 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 YAP1P46937 504 aaKnown RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 CYB561P49447 251 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 ACOT2P49753 483 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 HSPA2P54652 639 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 ATP1B3P54709 279 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 NUTF2P61970 127 aaKnown RBP2.67□□□□□ -1.98
CD44-229ENST00000528672 DEFA6Q01524 100 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 AESQ08117 197 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 RAB40BQ12829 278 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 MED21Q13503 144 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 GRB7Q14451 532 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 NECTIN1Q15223 517 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 NDUFA9Q16795 377 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 CYP51A1Q16850 503 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 KIF26BQ2KJY2 2108 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 SLC25A52Q3SY17 297 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 C14orf28Q4W4Y0 310 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 C14orf177Q52M58 125 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 C6orf226Q5I0X4 101 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 SLC22A10Q63ZE4 541 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 OR52W1Q6IF63 320 aa2.67□□□□□ -1.98
CD44-229ENST00000528672 NIPAL1Q6NVV3 410 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms