RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 REG3GQ6UW15 175 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 CERS6Q6ZMG9 384 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 ZNF730Q6ZMV8 503 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 NCCRP1Q6ZVX7 275 aaPredicted RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 AKAP14Q86UN6 197 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 LINC00518Q8N0U6 118 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 CENPSQ8N2Z9 138 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 DHRSXQ8N5I4 330 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 ZNF680Q8NEM1 530 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 OR2AP1Q8NGE2 309 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 OR52I1Q8NGK6 324 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 OR6F1Q8NGZ6 308 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 OR4Q3Q8NH05 313 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 PLPPR1Q8TBJ4 325 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 TCP10LQ8TDR4 215 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 PCNPQ8WW12 178 aaKnown RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 DLX4Q92988 240 aaPredicted RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 UBE2E3Q969T4 207 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 BIRC7Q96CA5 298 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 RCHY1Q96PM5 261 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 MAPKAP1Q9BPZ7 522 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 TSGA10Q9BZW7 698 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 TOLLIPQ9H0E2 274 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 CENPHQ9H3R5 247 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 LIME1Q9H400 295 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 SP140LQ9H930 580 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 NMUR1Q9HB89 426 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 THYN1Q9P016 225 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 NXT1Q9UKK6 140 aaKnown RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 RARRES3Q9UL19 164 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 CDH10Q9Y6N8 788 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 NSG1A0A0A6YYJ2 146 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 GOLGA8KD6RF30 607 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 NEDD8-MDP1E9PL57 170 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 CFLARO15519 480 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 HPP00738 406 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 F10P00742 488 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 CA1P00915 261 aaPredicted RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 MBL2P11226 248 aaPredicted RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 MAGP20916 626 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 SYT1P21579 422 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 UGT2B10P36537 528 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 ACVR1BP36896 505 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 CEACAM3P40198 252 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 NSG1P42857 185 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 MAGEA2P43356 314 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 BDKRB1P46663 353 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 ZFP36L2P47974 494 aaKnown RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 CX3CR1P49238 355 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 HLCSP50747 726 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 RPL14P50914 215 aaKnown RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 RAB14P61106 215 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 RPL10AP62906 217 aaKnown RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 NTHL1P78549 312 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 PITPNAQ00169 270 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 MED21Q13503 144 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 SLC17A1Q14916 467 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 STEAP1BQ6NZ63 245 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 C19orf35Q6ZS72 473 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 SLC25A48Q6ZT89 311 aaKnown RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 MCOLN2Q8IZK6 566 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 LIX1Q8N485 282 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 OR5L2Q8NGL0 311 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 OR5M1Q8NGP8 315 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 OR1B1Q8NGR6 318 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 DNAJB3Q8WWF6 145 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 MYDGFQ969H8 173 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 TMA16Q96EY4 203 aaKnown RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 CELF6Q96J87 481 aaKnown RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 ULBP2Q9BZM5 246 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 SYT4Q9H2B2 425 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 OR51M1Q9H341 326 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 WDR55Q9H6Y2 383 aaPredicted RBP4.55□□□□□ -1.68
PCF11-202ENST00000528336 FOLH1BQ9HBA9 442 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 TUBGCP4Q9UGJ1 667 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 MGAT4AQ9UM21 535 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 HYOU1Q9Y4L1 999 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 PHIPQ8WWQ0 1821 aa4.55□□□□□ -1.68
PCF11-202ENST00000528336 ADGRA3Q8IWK6 1321 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ATAD5Q96QE3 1844 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 A0A1B0GTH9 108 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 GOLGA8JA6NMD2 632 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 CENPXA8MT69 81 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 H3BN98 237 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 TM9SF1O15321 606 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 KIAA0513O60268 411 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ACTL6AO96019 429 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 IFNW1P05000 195 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 IFNA6P05013 189 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 KLK1P06870 262 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 GP1BAP07359 652 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ANXA5P08758 320 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 PGAM1P18669 254 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 IVDP26440 423 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 HTR2CP28335 458 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 OPRD1P41143 372 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 KIR3DL2P43630 455 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 QARSP47897 775 aaKnown RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 CSRP3P50461 194 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 IFFO1Q0D2I5 559 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms