RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 P4HTMQ9NXG6 502 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ZNF226Q9NYT6 803 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 DNAJC27Q9NZQ0 273 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 KLRF1Q9NZS2 232 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 PPP4R1LQ9P1A2 415 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 IL20RAQ9UHF4 553 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 B3GNT3Q9Y2A9 372 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 BSNQ9UPA5 3926 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 KIAA2026Q5HYC2 2103 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SPENQ96T58 3664 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 IGKV1D-42A0A075B6H8 117 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 A0A087WUJ7 227 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 A0A0G2JMM0 328 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 A0A1W2PPB8 328 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 A0A1W2PQD3 144 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 A0A1W2PRS3 328 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 DPPA5A6NC42 116 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 MFSD2BA6NFX1 497 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 UNC119BA6NIH7 251 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 KIR3DP1A8MWS1 328 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 CDRT15L2A8MXV6 281 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 EFCAB9A8MZ26 197 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 VWC2LB2RUY7 222 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 C21orf140B9A014 251 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 LRRN3E7EW58 273 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 SMAD9O15198 467 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 EIF4E2O60573 245 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 FAM20BO75063 409 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 NCR1O76036 304 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 PTBP3O95758 552 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 CH25HO95992 272 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 HPP00738 406 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 F10P00742 488 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 MT-ATP6P00846 226 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 LIPFP07098 398 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 HTR1AP08908 422 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 CD63P08962 238 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 HSMCR30P0CW71 290 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 GP1BBP13224 206 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 CEACAM1P13688 526 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 GABRB1P18505 474 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 CRHBPP24387 322 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 EEF1B2P24534 225 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 FPR3P25089 353 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TACR3P29371 465 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 RBMS1P29558 406 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 IFNGR2P38484 337 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 PTGDSP41222 190 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 SLC6A8P48029 635 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 PCYT1AP49585 367 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TMED10P49755 219 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 HLCSP50747 726 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 SSR4P51571 173 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 P2RX1P51575 399 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 MLF1P58340 268 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 FXYD6P3P58550 94 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 CDC42P60953 191 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 PRKCDQ05655 676 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TSPAN31Q12999 210 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 IL18R1Q13478 541 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 IL18Q14116 193 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 GINS1Q14691 196 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 SPCS2Q15005 226 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 QPRTQ15274 297 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 INPP5JQ15735 1006 aaPredicted RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 NTRK2Q16620 822 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 NDUFA5Q16718 116 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 BEAN1Q3B7T3 259 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 CLEC12AQ5QGZ9 265 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 RBM48Q5RL73 367 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 SLX4IPQ5VYV7 408 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 C12orf73Q69YU5 71 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 WBP2NLQ6ICG8 309 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ULK3Q6PHR2 472 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ZNF620Q6ZNG0 422 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 Q6ZSN1 163 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 RASSF6Q6ZTQ3 369 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 RNF144BQ7Z419 303 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 BCDIN3DQ7Z5W3 292 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 SLC51BQ86UW2 128 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TMPRSS12Q86WS5 348 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 RPS19BP1Q86WX3 136 aaKnown RBP3.72□□□□□ -1.81
CD44-226ENST00000527889 RAB43Q86YS6 212 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TMEM156Q8N614 296 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TCEANCQ8N8B7 351 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 POC5Q8NA72 575 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TSPAN14Q8NG11 270 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 OR4Q3Q8NH05 313 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 OR5W2Q8NH69 310 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 GPR119Q8TDV5 335 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 OIT3Q8WWZ8 545 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TMCO6Q96DC7 493 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 BPIFA2Q96DR5 249 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 SAMD8Q96LT4 415 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 SNX18Q96RF0 628 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 ABHD1Q96SE0 405 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 TSSK6Q9BXA6 273 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 VCX2Q9H322 139 aa3.72□□□□□ -1.81
CD44-226ENST00000527889 METTL7AQ9H8H3 244 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms