RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 MAN2C1Q9NTJ4 1040 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 GMPR2Q9P2T1 348 aaKnown RBP12.13□□□□□ -0.47
CAPN1-212ENST00000527887 TMEM5Q9Y2B1 443 aa12.13□□□□□ -0.47
CAPN1-212ENST00000527887 A0A087WUU8 490 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 C12orf71A8MTZ7 269 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 FFAR1O14842 300 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 PPIHO43447 177 aaKnown RBP12.12□□□□□ -0.47
CAPN1-212ENST00000527887 PIP5K1CO60331 668 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF682O95780 498 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 COX5BP10606 129 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 CCNOP22674 350 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
CAPN1-212ENST00000527887 VHLP40337 213 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 SCGB2A2Q13296 93 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 TOP3AQ13472 1001 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-212ENST00000527887 MBNL2Q5VZF2 373 aaKnown RBP12.12□□□□□ -0.47
CAPN1-212ENST00000527887 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 OR51A7Q8NH64 312 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 YIPF5Q969M3 257 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 FAM162AQ96A26 154 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 SLCO4A1Q96BD0 722 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 GRHPRQ9UBQ7 328 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 NDRG4Q9ULP0 352 aaKnown RBP12.12□□□□□ -0.47
CAPN1-212ENST00000527887 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 MALRD1Q5VYJ5 2156 aa12.12□□□□□ -0.47
CAPN1-212ENST00000527887 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 A0A1W2PRQ8 180 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 PLSCR5A0PG75 271 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 H0YJX3 145 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 NCR1O76036 304 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 PRSS23O95084 383 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 BAG2O95816 211 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 MSMBP08118 114 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 CD14P08571 375 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 NCK1P16333 377 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 MSR1P21757 451 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 FASP25445 335 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 LAP3P28838 519 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 MAGEB1P43366 347 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 YAP1P46937 504 aaKnown RBP12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ZNF81P51508 661 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 CCL8P80075 99 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 FMODQ06828 376 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 FHL1Q13642 323 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 DGCR6Q14129 220 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ZMAT1Q5H9K5 638 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ZER1Q7Z7L7 766 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ICA1LQ8NDH6 482 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 TMEM186Q96B77 213 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ELMOD3Q96FG2 381 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
CAPN1-212ENST00000527887 PYURFQ96I23 114 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 HSH2DQ96JZ2 352 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 TSPAN32Q96QS1 320 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 DIRC2Q96SL1 478 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 EGLN1Q9GZT9 426 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 NMNAT1Q9HAN9 279 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-212ENST00000527887 RHCGQ9UBD6 479 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 FAM32AQ9Y421 112 aaKnown RBP12.11□□□□□ -0.47
CAPN1-212ENST00000527887 ENPP4Q9Y6X5 453 aa12.11□□□□□ -0.47
CAPN1-212ENST00000527887 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 TRAV27A0A087WT01 109 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 A0A0A6YYJ9 748 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 J3KTA2 159 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 XKRYO14609 159 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
CAPN1-212ENST00000527887 TCF21O43680 179 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 SERPINA1P01009 418 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 ADH4P08319 380 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 GAAP10253 952 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 RPL4P36578 427 aaKnown RBP12.1□□□□□ -0.47
CAPN1-212ENST00000527887 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 LMO4P61968 165 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 ERVK-25P63136 954 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 HFEQ30201 348 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 KRTAP24-1Q3LI83 254 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 AKR7LQ8NHP1 331 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-212ENST00000527887 RAB39BQ96DA2 213 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 TIMD4Q96H15 378 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 COG8Q96MW5 612 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 KRCC1Q9NPI7 259 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-212ENST00000527887 POLE4Q9NR33 117 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 TBCCD1Q9NVR7 557 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
CAPN1-212ENST00000527887 ANK2Q01484 3957 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms