RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ZNF615Q8N8J6 731 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 PSMF1Q92530 271 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 CCDC120Q96HB5 630 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 PFDN2Q9UHV9 154 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 FITM1A5D6W6 292 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 UBL3O95164 117 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 UBBP0CG47 229 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 B4GALT1P15291 398 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 SOWAHCQ53LP3 525 aaPredicted RBP13.57□□□□□ -0.24
USP47-207ENST00000527733 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 PIGTQ969N2 578 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 DCLRE1CQ96SD1 692 aaKnown RBP13.57□□□□□ -0.24
USP47-207ENST00000527733 PRRT1Q99946 306 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 CRLF2Q9HC73 371 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 LANCL2Q9NS86 450 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
USP47-207ENST00000527733 H7C417 338 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 C1QCP02747 245 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 PET100P0DJ07 73 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 IL7P13232 177 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 TAS2R19P59542 299 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 C11orf40Q8WZ69 217 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 SNAPC3Q92966 411 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 TGIF2Q9GZN2 237 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 LIN7BQ9HAP6 207 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 SLCO1B1Q9Y6L6 691 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 R4GMQ9 66 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 SVILO95425 2214 aa13.57□□□□□ -0.24
USP47-207ENST00000527733 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 A8MV72 311 aaPredicted RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 CTSBP07858 339 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 CPT2P23786 658 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 HLA-DMAP28067 261 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 HYAL4Q2M3T9 481 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 OR2G2Q8NGZ5 317 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 RAB3CQ96E17 227 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 CMSS1Q9BQ75 279 aaKnown RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 CACNA1HO95180 2353 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 PRH1P02810 166 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 RAC2P15153 192 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 SEC61A1P61619 476 aaKnown RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 ATXN7L3Q14CW9 347 aaPredicted RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 FXNQ16595 210 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 SLC25A46Q96AG3 418 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 SELENOIQ9C0D9 397 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 SLCO1C1Q9NYB5 712 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 HSPB11Q9Y547 144 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 NUBP2Q9Y5Y2 271 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 DOCK4Q8N1I0 1966 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 ZNF780AO75290 641 aaPredicted RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 GUSBP08236 651 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 FXYD4P59646 89 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 RNPS1Q15287 305 aaKnown RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 PRSS53Q2L4Q9 553 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 LINC00299Q6ZSB3 139 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 FAM71CQ8NEG0 241 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 OR8D4Q8NGM9 314 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 OR10D3Q8NH80 312 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 OTOSQ8NHW6 89 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 APOBEC4Q8WW27 367 aaKnown RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 FOXB1Q99853 325 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 LUZP4Q9P127 313 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 CHD5Q8TDI0 1954 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 SNAPC5O75971 98 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 CCL3P10147 92 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 ANGPTL5Q86XS5 388 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 RDH10Q8IZV5 341 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 CCDC71LQ8N9Z2 235 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 C1QTNF6Q9BXI9 259 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 ISG20L2Q9H9L3 353 aaKnown RBP13.56□□□□□ -0.24
USP47-207ENST00000527733 GPR84Q9NQS5 396 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 CEP250Q9BV73 2442 aa13.56□□□□□ -0.24
USP47-207ENST00000527733 LOC100289279A0A1B0GTE1 492 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 PLPP3O14495 311 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 SLC34A2O95436 690 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 PCSK6P29122 969 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 BLVRBP30043 206 aaPredicted RBP13.55□□□□□ -0.24
USP47-207ENST00000527733 NR4A2P43354 598 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 ADGRE4PQ86SQ3 457 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 OR5M9Q8NGP3 310 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 OR11L1Q8NGX0 322 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 OR14J1Q9UGF5 321 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 SLC22A13Q9Y226 551 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 RCE1Q9Y256 329 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 APEX1P27695 318 aaKnown RBP13.55□□□□□ -0.24
USP47-207ENST00000527733 SOX18P35713 384 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 LRRC37A5PQ49AS3 106 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.55□□□□□ -0.24
USP47-207ENST00000527733 CMTM1Q8IZ96 169 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 PRR18Q8N4B5 295 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 BHLHE23Q8NDY6 225 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 SLCO5A1Q9H2Y9 848 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 RNF167Q9H6Y7 350 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 RAB22AQ9UL26 194 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 ICAM5Q9UMF0 924 aa13.55□□□□□ -0.24
USP47-207ENST00000527733 GMEB1Q9Y692 573 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms