RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ALDOBP05062 364 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 HTR2CP28335 458 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 EFNB2P52799 333 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 MYBPHQ13203 477 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 PCGF3Q3KNV8 242 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 THEM4Q5T1C6 240 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 NHLRC1Q6VVB1 395 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.71□□□□□ -0.21
USH1C-207ENST00000527720 SPICQ8N5J4 248 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 NKAIN3Q8N8D7 197 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 OR13C3Q8NGS6 347 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 SPACA9Q96E40 222 aaPredicted RBP13.71□□□□□ -0.21
USH1C-207ENST00000527720 RADILQ96JH8 1075 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 MRPL13Q9BYD1 178 aaKnown RBP13.71□□□□□ -0.21
USH1C-207ENST00000527720 DEFB126Q9BYW3 111 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 TAS2R4Q9NYW5 299 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 A0A0A6YYH2 397 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 TMEM269A0A1B0GVZ9 245 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 LOC107986453A0A1B0GWG9 222 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 A6NJ64 397 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 SNRPGP15A8MWD9 76 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 RAD1O60671 282 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 H2BFMP0C1H6 154 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 DNASE1L1P49184 302 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 BIDP55957 195 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 CAMK2DQ13557 499 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 RBMS2Q15434 407 aaKnown RBP13.71□□□□□ -0.21
USH1C-207ENST00000527720 LCN10Q6JVE6 187 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 PLPP7Q8NBV4 271 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 OR2M3Q8NG83 312 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 OR10H5Q8NGA6 315 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 ELP5Q8TE02 316 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 SLC25A43Q8WUT9 341 aaPredicted RBP13.71□□□□□ -0.21
USH1C-207ENST00000527720 RELTQ969Z4 430 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 FOXRED1Q96CU9 486 aaPredicted RBP13.71□□□□□ -0.21
USH1C-207ENST00000527720 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 RASL10BQ96S79 203 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 APMAPQ9HDC9 416 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 B3GAT1Q9P2W7 334 aa13.71□□□□□ -0.21
USH1C-207ENST00000527720 EML6Q6ZMW3 1958 aa13.71□□□□□ -0.22
USH1C-207ENST00000527720 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 IGKV1D-43A0A0B4J1Z2 117 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 ADH6P28332 368 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 PRSS3P35030 304 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 ZP1P60852 638 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 SNTA1Q13424 505 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 ZNF239Q16600 458 aaKnown RBP13.7□□□□□ -0.22
USH1C-207ENST00000527720 C6orf183Q5T699 404 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 LINC00346Q8IVM7 164 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 UEVLDQ8IX04 471 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 FAM109AQ8N4B1 249 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 SNAPC3Q92966 411 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 PTX4Q96A99 478 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 OCIAD1Q9NX40 245 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 HRH3Q9Y5N1 445 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 TRAV18A0A075B6X5 111 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 GABRA1P14867 456 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 DNASE1P24855 282 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 EIF1P41567 113 aaKnown RBP13.7□□□□□ -0.22
USH1C-207ENST00000527720 HTR2BP41595 481 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 RIPPLY1Q0D2K3 151 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 PHF19Q5T6S3 580 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 SLC25A25Q6KCM7 469 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 IFI44Q8TCB0 444 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 EDAQ92838 391 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 GAREM1Q9H706 876 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 BEX1Q9HBH7 125 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 CYB5R1Q9UHQ9 305 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 TRIOBPQ9H2D6 2365 aa13.7□□□□□ -0.22
USH1C-207ENST00000527720 SHISA8B8ZZ34 492 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 TP53I11O14683 189 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
USH1C-207ENST00000527720 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 LAP3P28838 519 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 ACTBP60709 375 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 ACTG1P63261 375 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 C1orf100Q5SVJ3 147 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 GLYATL3Q5SZD4 288 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 ZNF626Q68DY1 528 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 TMEM81Q6P7N7 255 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 RHOUQ7L0Q8 258 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 OR11H4Q8NGC9 324 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 C11orf40Q8WZ69 217 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 ATG5Q9H1Y0 275 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 PTGES2Q9H7Z7 377 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 PCDHGA5Q9Y5G8 931 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 SNAPC5O75971 98 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 IGHG1P01857 330 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 TPOP07202 933 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 RAD52P43351 418 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 P2RY4P51582 365 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 GNG2P59768 71 aa13.69□□□□□ -0.22
USH1C-207ENST00000527720 TRA2AQ13595 282 aaKnown RBP eCLIP13.69□□□□□ -0.22
USH1C-207ENST00000527720 PEAR1Q5VY43 1037 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms