RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 GFYI3L273 518 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 CDC7O00311 574 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TNFSF11O14788 317 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 RIPK2O43353 540 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 HCRTR1O43613 425 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 RAD1O60671 282 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TSC22D2O75157 780 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TNFSF15O95150 251 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 GUCA1CO95843 209 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 C8GP07360 202 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 UQCRHP07919 91 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 ANXA4P09525 319 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 RRASP10301 218 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 FOLR1P15328 257 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 NELFEP18615 380 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 MAGP20916 626 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 GCAP28676 217 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 IMPA1P29218 277 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 PRDX3P30048 256 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 MDH2P40926 338 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 MAGEA12P43365 314 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 GABRA4P48169 554 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 RGS4P49798 205 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 EMDP50402 254 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 SERPINB8P50452 374 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 P2RY4P51582 365 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 PSMD7P51665 324 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 RP1P56715 2156 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 ERVPABLB-1P60509 514 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 RAB10P61026 200 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TBPL1P62380 186 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 CBX1P83916 185 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 SRSF6Q13247 344 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 OR4D1Q15615 310 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 UBE2V2Q15819 145 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 UAP1Q16222 522 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 SLC5A12Q1EHB4 618 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 ANKDD1AQ495B1 522 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 LGSNQ5TDP6 509 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TTC23LQ6PF05 361 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 SBSNQ6UWP8 590 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TRMT10CQ7L0Y3 403 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 LRRC70Q7Z2Q7 622 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 NET1Q7Z628 596 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 C11orf53Q8IXP5 236 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 ELMOD2Q8IZ81 293 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 C2orf73Q8N5S3 287 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 ARFGAP2Q8N6H7 521 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TRIML2Q8N7C3 387 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 RNF148Q8N7C7 305 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 EIF1ADQ8N9N8 165 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 OR2L3Q8NG85 312 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 OR56B1Q8NGI3 324 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 OR2A1Q8NGT9 310 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 OR9A1PQ8NGU1 263 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 DCAKDQ8WVC6 231 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 EEF1AKMT1Q8WVE0 214 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 SLC35B4Q969S0 331 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 NCLNQ969V3 563 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 CNDP1Q96KN2 507 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 ZNF578Q96N58 590 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 CYTH2Q99418 400 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 DDA1Q9BW61 102 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 HCAR1Q9BXC0 346 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 NSRP1Q9H0G5 558 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 KAT8Q9H7Z6 458 aaKnown RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 ROPN1Q9HAT0 212 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 YAE1D1Q9NRH1 226 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TNFRSF19Q9NS68 423 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 HPF1Q9NWY4 346 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 SOHLH2Q9NX45 425 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 SLC39A1Q9NY26 324 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 STOX2Q9P2F5 926 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 P2RX2Q9UBL9 471 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 B4GALT7Q9UBV7 327 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 TAC3Q9UHF0 121 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 PDE10AQ9Y233 779 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 EP300Q09472 2414 aaPredicted RBP2.89□□□□□ -1.95
CD44-219ENST00000525685 DNAH14Q0VDD8 3507 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 PCNX2A6NKB5 2137 aa2.89□□□□□ -1.95
CD44-219ENST00000525685 DCHS1Q96JQ0 3298 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 ZNF292O60281 2723 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 LAMA1P25391 3075 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 IGKV1-8A0A0C4DH67 115 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 EXOC1LA0A1B0GW35 172 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 NCF1BA6NI72 391 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 NCF1CA8MVU1 366 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 TRIM49D1C9J1S8 452 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 POLR1CO15160 346 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 NVLO15381 856 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 PPIHO43447 177 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 DUSP14O95147 198 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 SLC2A10O95528 541 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SHBGP04278 402 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 C2P06681 752 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SLC35E2BP0CK96 405 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CCDC166P0CW27 439 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 LIPCP11150 499 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 NCF1P14598 390 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms