RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TSPEARQ8WU66 669 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 ITLN1Q8WWA0 313 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 SLC25A28Q96A46 364 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 SAMD8Q96LT4 415 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 SIGLEC11Q96RL6 698 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 MS4A7Q9GZW8 240 aaPredicted RBP20.15■□□□□ 0.82
USP47-205ENST00000525257 OR5V1Q9UGF6 321 aa20.15■□□□□ 0.82
USP47-205ENST00000525257 NDRG4Q9ULP0 352 aaKnown RBP20.15■□□□□ 0.82
USP47-205ENST00000525257 IGHV3OR16-10A0A075B7F0 116 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 C12orf71A8MTZ7 269 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 A8MXK9 166 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 F5H0A9 414 aaPredicted RBP20.14■□□□□ 0.81
USP47-205ENST00000525257 SCG5P05408 212 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 THRBP10828 461 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 IFI30P13284 250 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 DEFA6Q01524 100 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 ESCO2Q56NI9 601 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 NPEPL1Q8NDH3 523 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 BPIFA2Q96DR5 249 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 EMC7Q9NPA0 242 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 MAN2C1Q9NTJ4 1040 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 PPP1R3CQ9UQK1 317 aa20.14■□□□□ 0.81
USP47-205ENST00000525257 H7C1C5 153 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 HTR5AP47898 357 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 LCN6P62502 163 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 IL13RA1P78552 427 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 PDLIM3Q53GG5 364 aaPredicted RBP20.13■□□□□ 0.81
USP47-205ENST00000525257 CALHM3Q86XJ0 350 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 MICU2Q8IYU8 434 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 STON2Q8WXE9 905 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 POLE4Q9NR33 117 aa20.13■□□□□ 0.81
USP47-205ENST00000525257 TRAV27A0A087WT01 109 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 FBP2O00757 339 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 DOK2O60496 412 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 IGHV4-38-2P0DP08 117 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 KITLGP21583 273 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 MDH2P40926 338 aaKnown RBP20.12■□□□□ 0.81
USP47-205ENST00000525257 CYLC2Q14093 348 aaPredicted RBP20.12■□□□□ 0.81
USP47-205ENST00000525257 SLC9A3R2Q15599 337 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 FAM205BPQ63HN1 556 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 SYT9Q86SS6 491 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 JAZF1Q86VZ6 243 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 LRRC75AQ8NAA5 344 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 OR52E2Q8NGJ4 325 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 OR51A7Q8NH64 312 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 CMBLQ96DG6 245 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 OR2V2Q96R30 315 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 ECSITQ9BQ95 431 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 TBCCD1Q9NVR7 557 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 IL19Q9UHD0 177 aa20.12■□□□□ 0.81
USP47-205ENST00000525257 SOX21Q9Y651 276 aaPredicted RBP20.12■□□□□ 0.81
USP47-205ENST00000525257 A6NIZ1 184 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 CEACAM18A8MTB9 384 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 COX5BP10606 129 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 CD80P33681 288 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 ERFP50548 548 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 RAP1BP61224 184 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 RAP1AP62834 184 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 LRRC23Q53EV4 343 aaPredicted RBP20.11■□□□□ 0.81
USP47-205ENST00000525257 LEG1Q6P5S2 330 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 PARP8Q8N3A8 854 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 STARD10Q9Y365 291 aa20.11■□□□□ 0.81
USP47-205ENST00000525257 POM121CA8CG34 1229 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 TMEM178BH3BS89 294 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 CLDN34H7C241 214 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 SURF4O15260 269 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 GPANK1O95872 356 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 FUT4P22083 530 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 MMP16P51512 607 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 PAX8Q06710 450 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 ST3GAL3Q11203 375 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 CYBRD1Q53TN4 286 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 C1orf94Q6P1W5 598 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 MUC20Q8N307 709 aaPredicted RBP20.1■□□□□ 0.81
USP47-205ENST00000525257 TPD52L3Q96J77 140 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 ATP6V1G3Q96LB4 118 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 SH3GL1Q99961 368 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 A4GNTQ9UNA3 340 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 LRCH1Q9Y2L9 728 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 VWFP04275 2813 aa20.1■□□□□ 0.81
USP47-205ENST00000525257 SGCEO43556 437 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 ZNF205O95201 554 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 IFNA14P01570 189 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 MDKP21741 143 aaPredicted RBP20.09■□□□□ 0.81
USP47-205ENST00000525257 MTNR1AP48039 350 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 SCRN3Q0VDG4 424 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 TTMPQ5BVD1 217 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 VASH1Q7L8A9 365 aaPredicted RBP20.09■□□□□ 0.81
USP47-205ENST00000525257 NRMQ8IXM6 262 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 OR5AS1Q8N127 324 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 OR8J3Q8NGG0 315 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 SLC7A6Q92536 515 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 HAVCR1Q96D42 359 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 PRRC1Q96M27 445 aa20.09■□□□□ 0.81
USP47-205ENST00000525257 SSBP3Q9BWW4 388 aaPredicted RBP20.09■□□□□ 0.81
USP47-205ENST00000525257 FXYD1O00168 92 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 WNT2P09544 360 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 RPS2P15880 293 aaKnown RBP20.08■□□□□ 0.81
USP47-205ENST00000525257 TUBG1P23258 451 aa20.08■□□□□ 0.81
USP47-205ENST00000525257 FHL1Q13642 323 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms