RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 COTL1Q14019 142 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TMEM176BQ3YBM2 270 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 MESTQ5EB52 335 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 FHL5Q5TD97 284 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TRAM1L1Q8N609 369 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 CCDC54Q8NEL0 328 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 OR2L5Q8NG80 312 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF480Q8WV37 535 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TIFAQ96CG3 184 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 SLC25A36Q96CQ1 311 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 SEH1LQ96EE3 360 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 IP6K3Q96PC2 410 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 MYADMQ96S97 322 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 NDUFAF3Q9BU61 184 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 WNT5BQ9H1J7 359 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 C11orf1Q9H5F2 150 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 KCNJ16Q9NPI9 418 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 UBQLN4Q9NRR5 601 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 A0A0G2JN53 185 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 A0A1W2PPE2 198 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 SMCO3A2RU48 225 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF726A6NNF4 738 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 PRR32B1ATL7 298 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TRDCB7Z8K6 153 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 K7ERQ8 282 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF264O43296 627 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 FOXS1O43638 330 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 MOSPD3O75425 235 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 STC2O76061 302 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TMIGD3P0DMS9 266 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 C6P13671 934 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 C5AR1P21730 350 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ARRB1P49407 418 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 DIO1P49895 249 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 SOX8P57073 446 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TBPL1P62380 186 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 QRFPP83859 136 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ARHGAP19Q14CB8 494 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ARHGAP11BQ3KRB8 267 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 AMZ1Q400G9 498 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 C9orf64Q5T6V5 341 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 HIST2H3PS2Q5TEC6 136 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 CDPF1Q6NVV7 123 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 PRSS54Q6PEW0 395 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 GABRG1Q8N1C3 465 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 CRIPAKQ8N1N5 446 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 BPIFB2Q8N4F0 458 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZSCAN4Q8NAM6 433 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 OR1J1Q8NGS3 322 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 MVB12AQ96EY5 273 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 DECR2Q9NUI1 292 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 SIDT1Q9NXL6 827 aaKnown RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 SLC7A7Q9UM01 511 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ADAM18Q9Y3Q7 739 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TRPM6Q9BX84 2022 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 OR52A4PA6NMU1 304 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF587BE7ETH6 402 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 DVL1O14640 695 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ARPC3O15145 178 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TGOLN2O43493 480 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 FKTNO75072 461 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF25P17030 456 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 INSM1Q01101 510 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 CTXN3Q4LDR2 81 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 FAM220AQ7Z4H9 259 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ARL14Q8N4G2 192 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 OR6K6Q8NGW6 343 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ASB17Q8WXJ9 295 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 PLEKHA2Q9HB19 425 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 WSB2Q9NYS7 404 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-213ENST00000523488 TRPV2Q9Y5S1 764 aa7.56□□□□□ -1.2
CSMD1-213ENST00000523488 ADRB3P13945 408 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 FABP4P15090 132 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 AKR1C4P17516 323 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 FUT1P19526 365 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 RGS19P49795 217 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SULT1A1P50225 295 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 NANOS3P60323 173 aaKnown RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 DLK1P80370 383 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 NHLH2Q02577 135 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 RFLNAQ6ZTI6 216 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF740Q8NDX6 193 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 OR14K1Q8NGZ2 314 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 M1APQ8TC57 530 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CCDC74AQ96AQ1 378 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 GNRHR2Q96P88 292 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 TGM7Q96PF1 710 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CNN2Q99439 309 aaKnown RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ATG101Q9BSB4 218 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 NRSN2Q9GZP1 204 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 PRSS16Q9NQE7 514 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 DOK5Q9P104 306 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 LRFN1Q9P244 771 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 HS3ST2Q9Y278 367 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 VSIG4Q9Y279 399 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 MMP24Q9Y5R2 645 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF705GA8MUZ8 300 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms