RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 Q96M85 177 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 FNDC11Q9BVV2 318 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 POLR2J2Q9GZM3 115 aaKnown RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 POLR2J3Q9H1A7 115 aaKnown RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 CYSLTR2Q9NS75 346 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 MAN2C1Q9NTJ4 1040 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 TMEM106BQ9NUM4 274 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 KLHL21Q9UJP4 597 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
MRPS28-209ENST00000522987 ZDHHC8Q9ULC8 765 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 STARD10Q9Y365 291 aa13.01□□□□□ -0.33
MRPS28-209ENST00000522987 GMNCA6NCL1 334 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 C12orf71A8MTZ7 269 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 FOXH1O75593 365 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF682O95780 498 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 IGF2P01344 180 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 THRBP10828 461 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 PCBD1P61457 104 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 CDK5R2Q13319 367 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 FHL1Q13642 323 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 ZMYND11Q15326 602 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 KLF17Q5JT82 389 aaPredicted RBP13□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 FOXL2NBQ6ZUU3 175 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 ZMYND19Q96E35 227 aaPredicted RBP13□□□□□ -0.33
MRPS28-209ENST00000522987 PTTG3PQ9NZH4 202 aa13□□□□□ -0.33
MRPS28-209ENST00000522987 ELOVL7A1L3X0 281 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 DNAJC9-AS1A6NH13 148 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 A6NIZ1 184 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 CDC42EP2O14613 210 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 FFAR1O14842 300 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 SGCEO43556 437 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 GPANK1O95872 356 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 CD55P08174 381 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 ADH4P08319 380 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 DBHP09172 617 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF26P17031 533 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 GSTM3P21266 225 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 GATA3P23771 443 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 PRSS12P56730 875 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 RAP1BP61224 184 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 RAP1AP62834 184 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 SELENOWP63302 87 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 PRKCDQ05655 676 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 DBPQ10586 325 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 HLXQ14774 488 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 TRAM2Q15035 370 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 MESTQ5EB52 335 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 ZMAT1Q5H9K5 638 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 OR10AD1Q8NGE0 317 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 SGMS2Q8NHU3 365 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 RCN3Q96D15 328 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 RASD2Q96D21 266 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF48Q96MX3 618 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 PATZ1Q9HBE1 687 aaKnown RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 SAR1AQ9NR31 198 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 FGFR1OP2Q9NVK5 253 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 PLEK2Q9NYT0 353 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 IL20RAQ9UHF4 553 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
MRPS28-209ENST00000522987 AUP1Q9Y679 476 aa12.99□□□□□ -0.33
MRPS28-209ENST00000522987 A0A087WUU8 490 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 IFNW1P05000 195 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 CTLA4P16410 223 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 TNFSF4P23510 183 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 IFNA8P32881 189 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 LIPAP38571 399 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 BTG1P62324 171 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF154Q13106 437 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 FAM205BPQ63HN1 556 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 CGB2Q6NT52 195 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 ARL9Q6T311 187 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 VASH1Q7L8A9 365 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-209ENST00000522987 OFCC1Q8IZS5 231 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 FAM46AQ96IP4 442 aaKnown RBP12.98□□□□□ -0.33
MRPS28-209ENST00000522987 C1orf147Q96MC9 270 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-209ENST00000522987 ZNF570Q96NI8 536 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 OR2V2Q96R30 315 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 DIRC2Q96SL1 478 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 GID8Q9NWU2 228 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 CMTM6Q9NX76 183 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 ARMCX1Q9P291 453 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 GRHPRQ9UBQ7 328 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 CGGBP1Q9UFW8 167 aaPredicted RBP12.98□□□□□ -0.33
MRPS28-209ENST00000522987 NUP50Q9UKX7 468 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 PPP1R3CQ9UQK1 317 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 MGAM2Q2M2H8 2515 aa12.98□□□□□ -0.33
MRPS28-209ENST00000522987 TEX13CA0A0J9YWL9 993 aa12.97□□□□□ -0.33
MRPS28-209ENST00000522987 BBIP1A8MTZ0 92 aa12.97□□□□□ -0.33
MRPS28-209ENST00000522987 H0YL77 283 aa12.97□□□□□ -0.33
MRPS28-209ENST00000522987 H3BSA7 217 aa12.97□□□□□ -0.33
MRPS28-209ENST00000522987 XKRYO14609 159 aa12.97□□□□□ -0.33
MRPS28-209ENST00000522987 TMPRSS2O15393 492 aa12.97□□□□□ -0.33
MRPS28-209ENST00000522987 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
MRPS28-209ENST00000522987 TROVE2P10155 538 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms