RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SH3BGRP55822 239 aaPredicted RBP18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 NRN1LQ496H8 165 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF684Q5T5D7 378 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 LRRN1Q6UXK5 716 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 CFAP77Q6ZQR2 320 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 SLC16A14Q7RTX9 510 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 FAM220AQ7Z4H9 259 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 SKA3Q8IX90 412 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 YIPF7Q8N8F6 280 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 FBXO17Q96EF6 278 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 OR8B4Q96RC9 309 aa18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 MRM2Q9UI43 246 aaKnown RBP18.75■□□□□ 0.59
R3HCC1-208ENST00000522012 RER1O15258 196 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 WNT11O96014 354 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 TACSTD2P09758 323 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 AQP6Q13520 282 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 VASH1Q7L8A9 365 aaPredicted RBP18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF627Q7L945 461 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 KCTD20Q7Z5Y7 419 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 OR1K1Q8NGR3 316 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 RND1Q92730 232 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 SLAMF6Q96DU3 332 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 DMRTA2Q96SC8 542 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 MROQ9BYG7 248 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 ELOVL3Q9HB03 270 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 ACOXLQ9NUZ1 547 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 DPPA5A6NC42 116 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 SULT1C4O75897 302 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 PATE4P0C8F1 98 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 BMP5P22003 454 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 GBX2P52951 348 aaPredicted RBP18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 TGFBR3Q03167 851 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 ROM1Q03395 351 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 TSTQ16762 297 aaKnown RBP18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 ANKRD16Q6P6B7 361 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF679Q8IYX0 411 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 GJC3Q8NFK1 279 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 OR13F1Q8NGS4 319 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 OPALINQ96PE5 141 aa18.74■□□□□ 0.59
R3HCC1-208ENST00000522012 CIB4A0PJX0 185 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 E9PI62 339 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 CCL21O00585 134 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 LYZL6O75951 148 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 RPP14O95059 124 aaKnown RBP18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 LALBAP00709 142 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 CAPZA2P47755 286 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 GTF2A1P52655 376 aaPredicted RBP18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 PCBD1P61457 104 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 MLLT11Q13015 90 aaPredicted RBP18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 BEND4Q6ZU67 534 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 LUZP2Q86TE4 346 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 ZFP41Q8N8Y5 198 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 RNF133Q8WVZ7 376 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 BCL2L2Q92843 193 aaPredicted RBP18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 PELI1Q96FA3 418 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 TRIM36Q9NQ86 728 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 BATF3Q9NR55 127 aa18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF629Q9UEG4 869 aaPredicted RBP18.73■□□□□ 0.59
R3HCC1-208ENST00000522012 PNMA8CA0A1B0GUJ8 204 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 PRB1P04280 392 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 H2BFMP0C1H6 154 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 LIPAP38571 399 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 PSMB10P40306 273 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 TAF13Q15543 124 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 HIKESHIQ53FT3 197 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 LIPNQ5VXI9 398 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 OR7E24Q6IFN5 339 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 GABRG1Q8N1C3 465 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 OR10S1Q8NGN2 331 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 FGFBP3Q8TAT2 258 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 PIGMQ9H3S5 423 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 RNF121Q9H920 327 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 ISYNA1Q9NPH2 558 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 GRIP1Q9Y3R0 1128 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 TIMM10BQ9Y5J6 103 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 SVILO95425 2214 aa18.72■□□□□ 0.59
R3HCC1-208ENST00000522012 EEF1E1-BLOC1S5C9J1V9 151 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 EEF1E1O43324 174 aaKnown RBP18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 RAD51DO75771 328 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 ABHD16AO95870 558 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF32P17041 273 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 OPRL1P41146 370 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 RIDAP52758 137 aaKnown RBP18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 HIST1H3AP68431 136 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 ACSM1Q08AH1 577 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 SCRN3Q0VDG4 424 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 TSC22D1Q15714 1073 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 SLC36A2Q495M3 483 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 HIST2H3PS2Q5TEC6 136 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 HIST2H3AQ71DI3 136 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 SYT9Q86SS6 491 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 CXorf67Q86X51 503 aaPredicted RBP18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 EGFL6Q8IUX8 553 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF433Q8N7K0 673 aaPredicted RBP18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 SLC5A6Q9Y289 635 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 LRP12Q9Y561 859 aa18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 PRRC2CQ9Y520 2896 aaKnown RBP18.71■□□□□ 0.59
R3HCC1-208ENST00000522012 ZNF878C9JN71 531 aa18.7■□□□□ 0.58
R3HCC1-208ENST00000522012 DVL2O14641 736 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms