RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ZNF404Q494X3 552 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CT45A2Q5DJT8 189 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 OR2G6Q5TZ20 316 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 NIPAL1Q6NVV3 410 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF613Q6PF04 617 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 TMPRSS11FQ6ZWK6 438 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SNX29P2Q8IUI4 249 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CPOQ8IVL8 374 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 DND1Q8IYX4 353 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 GABRG1Q8N1C3 465 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 FBXL14Q8N1E6 418 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CENPSQ8N2Z9 138 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SIGLECL1Q8N7X8 197 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF614Q8N883 585 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 WDSUB1Q8N9V3 476 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 STEAP2Q8NFT2 490 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 OR4F15Q8NGB8 312 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 OR6K3Q8NGY3 331 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 B4GALNT2Q8NHY0 566 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 HSD17B8Q92506 261 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 MND1Q9BWT6 205 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 ASPNQ9BXN1 380 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 WDR12Q9GZL7 423 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 OR10A5Q9H207 317 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 OR52D1Q9H346 318 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 EVA1AQ9H8M9 152 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 MED20Q9H944 212 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM27Q9HBJ8 222 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 LPAR2Q9HBW0 351 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 HMG20AQ9NP66 347 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 PALMDQ9NP74 551 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 EXOSC4Q9NPD3 245 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 MEPEQ9NQ76 525 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 HINT3Q9NQE9 182 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CCDC59Q9P031 241 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 SEC14L4Q9UDX3 406 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 IL20RAQ9UHF4 553 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 CLEC4AQ9UMR7 237 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 MOKQ9UQ07 419 aa6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 EXOGQ9Y2C4 368 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-227ENST00000521387 A0A0B4J2E0 115 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 A0A1B0GX12 115 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 IRGMA1A4Y4 181 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 KPNA4O00629 521 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 BHLHE40O14503 412 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 TIMM23O14925 209 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 MYL12BO14950 172 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 ZIC3O60481 467 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 FSHBP01225 129 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 NGFRP08138 427 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 CPEP16870 476 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF12P17014 697 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 ADRA2CP18825 462 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 GALNSP34059 522 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 MTNR1AP48039 350 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 FABP6P51161 128 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 CTBP2P56545 445 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 RAB40BQ12829 278 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 TPBGQ13641 420 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 FHL1Q13642 323 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SERTAD2Q14140 314 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 NNATQ16517 81 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 BCL2A1Q16548 175 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SWI5Q1ZZU3 235 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SLC35F1Q5T1Q4 408 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 FAHD2BQ6P2I3 314 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 BEND4Q6ZU67 534 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 C1QL2Q7Z5L3 287 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 LHFPL3Q86UP9 236 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF485Q8NCK3 441 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 OR1J4Q8NGS1 313 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 OR13C2Q8NGS9 318 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 OR14L1PQ8NHC6 308 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 FANK1Q8TC84 345 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 CHPT1Q8WUD6 406 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 GATAD2BQ8WXI9 593 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 GTF3AQ92664 365 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 BPIFA2Q96DR5 249 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 FAHD2AQ96GK7 314 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SENP5Q96HI0 755 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 ZNF649Q9BS31 505 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 TMPRSS13Q9BYE2 586 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 PRRG3Q9BZD7 231 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 NGBQ9NPG2 151 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 ISYNA1Q9NPH2 558 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 KRCC1Q9NPI7 259 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 MED17Q9NVC6 651 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 STUB1Q9UNE7 303 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SIGLEC7Q9Y286 467 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM5Q9Y2B1 443 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 EXOSC1Q9Y3B2 195 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SF3B6Q9Y3B4 125 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 MED31Q9Y3C7 131 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 SPIN1Q9Y657 262 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 A3GALT2U3KPV4 340 aa6.3□□□□□ -1.4
CTNNA1-227ENST00000521387 TRAV27A0A087WT01 109 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 TMEM129A0AVI4 362 aa6.29□□□□□ -1.4
CTNNA1-227ENST00000521387 ZC3H12DA2A288 527 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms