RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 RAP1AP62834 184 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 IL13RA1P78552 427 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-204ENST00000521331 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 KLF17Q5JT82 389 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-204ENST00000521331 BEND6Q5SZJ8 279 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-204ENST00000521331 OR2Z1Q8NG97 314 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 COG8Q96MW5 612 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
PRKDC-204ENST00000521331 TBCCD1Q9NVR7 557 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 IL19Q9UHD0 177 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 PPP1R3CQ9UQK1 317 aa12.54□□□□□ -0.4
PRKDC-204ENST00000521331 A0A1W2PPL8 197 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 F5H0A9 414 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-204ENST00000521331 SHOX2O60902 331 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-204ENST00000521331 KITLGP21583 273 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 CPT2P23786 658 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 IFNA8P32881 189 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 MDH2P40926 338 aaKnown RBP12.53□□□□□ -0.4
PRKDC-204ENST00000521331 MTNR1AP48039 350 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 CTXN1P60606 82 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
PRKDC-204ENST00000521331 NANOGP8Q6NSW7 305 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 ERICH5Q6P6B1 374 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-204ENST00000521331 CLDN22Q8N7P3 220 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 OR8J3Q8NGG0 315 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 BPIFA2Q96DR5 249 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 C1orf147Q96MC9 270 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-204ENST00000521331 ECSITQ9BQ95 431 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 C1QTNF5Q9BXJ0 243 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 POLE4Q9NR33 117 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 ZNF446Q9NWS9 450 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 IL20RAQ9UHF4 553 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
PRKDC-204ENST00000521331 IFNL4K9M1U5 179 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 PPIAL4GP0DN37 164 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 IFI30P13284 250 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 OR1E2P47887 323 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 HTR5AP47898 357 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
PRKDC-204ENST00000521331 SCRN3Q0VDG4 424 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 ZMYND11Q15326 602 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 RABL3Q5HYI8 236 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 BCL6BQ8N143 479 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-204ENST00000521331 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
PRKDC-204ENST00000521331 ZNF48Q96MX3 618 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-204ENST00000521331 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 SIKE1Q9BRV8 207 aa12.52□□□□□ -0.41
PRKDC-204ENST00000521331 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-204ENST00000521331 ARHGAP32A7KAX9 2087 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 DOK2O60496 412 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 PAX8Q06710 450 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
PRKDC-204ENST00000521331 METTL21CQ5VZV1 264 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 BTNL3Q6UXE8 466 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 Q6ZR03 302 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 IGFN1Q86VF2 1251 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 LRRC75AQ8NAA5 344 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 OR52E2Q8NGJ4 325 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 ITLN1Q8WWA0 313 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 HAVCR1Q96D42 359 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 CMBLQ96DG6 245 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 PRRC1Q96M27 445 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 SLITRK2Q9H156 845 aa12.51□□□□□ -0.41
PRKDC-204ENST00000521331 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 CEACAM18A8MTB9 384 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 TMEM178BH3BS89 294 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 J3QW42 95 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 FBP2O00757 339 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 SGCEO43556 437 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 AHCYL1O43865 530 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 NPPAP01160 153 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 MMP16P51512 607 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 SLC9A3R2Q15599 337 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
PRKDC-204ENST00000521331 CYBRD1Q53TN4 286 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 COQ5Q5HYK3 327 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 SLC27A4Q6P1M0 643 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 LRRN1Q6UXK5 716 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 OAFQ86UD1 273 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 PARP8Q8N3A8 854 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 OR51A7Q8NH64 312 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 PTP4A1Q93096 173 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 MAGEB18Q96M61 343 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 OR2V2Q96R30 315 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 MRGBPQ9NV56 204 aa12.5□□□□□ -0.41
PRKDC-204ENST00000521331 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms