RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CDC20BQ86Y33 519 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 YIPF5Q969M3 257 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 MIB2Q96AX9 1013 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 NARS2Q96I59 477 aaKnown RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 RASL10BQ96S79 203 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 SELENOIQ9C0D9 397 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ADAM19Q9H013 955 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ZNF701Q9NV72 531 aaPredicted RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 RABL2AQ9UBK7 228 aaPredicted RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 RABL2BQ9UNT1 228 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 OR4C45A6NMZ5 311 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 TRAPPC2P0DI81 140 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 TRAPPC2BP0DI82 140 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 AKR1C4P17516 323 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 GABRA4P48169 554 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 STARP49675 285 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 BTG1P62324 171 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 EXT1Q16394 746 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 LINC01590Q5TEZ4 76 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 TCEAL6Q6IPX3 200 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 TCEAL3Q969E4 200 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 C12orf10Q9HB07 376 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 SVILO95425 2214 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 RIF1Q5UIP0 2472 aaKnown RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 TTC28Q96AY4 2481 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 GOSR2O14653 212 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ARPC5O15511 151 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 IGHV3-9P01782 118 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 TMEM225BP0DP42 221 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 RFC3P40938 356 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 OLFML2AQ68BL7 652 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 BTN2A1Q7KYR7 527 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 OR51S1Q8NGJ8 323 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ELP5Q8TE02 316 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 HOXB13Q92826 284 aaPredicted RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 ELMOD3Q96FG2 381 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 SORCS2Q96PQ0 1159 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 LDAHQ9H6V9 325 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 FBXL2Q9UKC9 423 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 IGKV3D-11A0A0A0MRZ8 115 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 MASP2O00187 686 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 TNFRSF10AO00220 468 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 TOX3O15405 576 aaPredicted RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 SLC22A5O76082 557 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 SIX6O95475 246 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 IFNA7P01567 189 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ADRB1P08588 477 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 LAP3P28838 519 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 UBE2MP61081 183 aaKnown RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ZNF574Q6ZN55 896 aaPredicted RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 LINC00696Q6ZRV3 163 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 FOXRED2Q8IWF2 684 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 TEX19Q8NA77 164 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ZNF485Q8NCK3 441 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 NUBPLQ8TB37 319 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ZNF285Q96NJ3 590 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 MARVELD1Q9BSK0 173 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 URM1Q9BTM9 101 aaKnown RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 SLA2Q9H6Q3 261 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 R4GMQ9 66 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 A0A087WV48 116 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 A0A1B0GW55 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 TMEM235A6NFC5 223 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 PIN1P1O15428 100 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 FARS2O95363 451 aaKnown RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 UBCP0CG48 685 aaKnown RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4L2P0CJ85 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4L3P0CJ86 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4L4P0CJ87 422 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4L5P0CJ88 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4L6P0CJ89 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4L7P0CJ90 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 POU3F2P20265 443 aaPredicted RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 GGTLC2Q14390 218 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 PMS2CLQ68D20 193 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 RAB11FIP2Q7L804 512 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ANGPTL5Q86XS5 388 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 BPIFB2Q8N4F0 458 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 OR6M1Q8NGM8 313 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 RNF128Q8TEB7 428 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 HAVCR1Q96D42 359 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ARL6Q9H0F7 186 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ZNF224Q9NZL3 707 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 DUX4Q9UBX2 424 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 CEP250Q9BV73 2442 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 GJE1A6NN92 205 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 SULT1B1O43704 296 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 FADS1O60427 444 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 PRAF2O60831 178 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 SLC6A1P30531 599 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 UQCRC1P31930 480 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ZNF93P35789 620 aaPredicted RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 RAD52P43351 418 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 PDSS1Q5T2R2 415 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms