RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SH3BP4Q9P0V3 963 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ACTR3BQ9P1U1 418 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 MYEF2Q9P2K5 600 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 MARCOQ9UEW3 520 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 OSGIN1Q9UJX0 560 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 BAG5Q9UL15 447 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 NPTNQ9Y639 398 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 RYR2Q92736 4967 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 DYNC2H1Q8NCM8 4307 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 RNF103-CHMP3A0A140T963 221 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PLSCR5A0PG75 271 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM72A0PK05 275 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 C3orf84H3BNL1 204 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 TRAPPC2LH3BP13 241 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 H3BS24 57 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SCN2BO60939 215 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PEX11AO75192 247 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 CRCPO75575 148 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 TSPAN9O75954 239 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 AKR7A3O95154 331 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ANP32DO95626 131 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SNAP29O95721 258 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PTHP01270 115 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 IGHV3-13P01766 116 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 IGHV2-70P01814 119 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PRB2P02812 416 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SFTPBP07988 381 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 CHRM4P08173 479 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ADH4P08319 380 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 FGF4P08620 206 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 QDPRP09417 244 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SBK3P0C264 359 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 CD79AP11912 226 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 HOXA5P20719 270 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 CXCR1P25024 350 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 GTF2E2P29084 291 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 TACR3P29371 465 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ARRB2P32121 409 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 RYKP34925 604 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SLC6A9P48067 706 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 IDH2P48735 452 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF81P51508 661 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 LINC00310P59036 64 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 KRTAP10-3P60369 221 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 RAB1AP62820 205 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 KCNJ10P78508 379 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 S100A12P80511 92 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 MXRA7P84157 204 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 KLF10Q13118 480 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 GSTA3Q16772 222 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF674Q2M3X9 581 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 DEFB112Q30KQ8 113 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SPDYE7PQ495Y7 208 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF385BQ569K4 471 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM53Q6P2H8 277 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 FRMD7Q6ZUT3 714 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PTCHD4Q6ZW05 846 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 C16orf62Q7Z3J2 963 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 DPPA2Q7Z7J5 298 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 DDIASQ8IXT1 998 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF781Q8N8C0 355 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZSCAN4Q8NAM6 433 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 RBM15BQ8NDT2 890 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 OR4S1Q8NGB4 309 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 OR10S1Q8NGN2 331 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 OR1J2Q8NGS2 313 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 RP9Q8TA86 221 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 OR5P2Q8WZ92 322 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 CCL17Q92583 94 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 KTI12Q96EK9 354 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 DNAJA3Q96EY1 480 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PLEKHA8Q96JA3 519 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 MAELQ96JY0 434 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 EGLN2Q96KS0 407 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 LRR1Q96L50 414 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 FCRL1Q96LA6 429 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF75AQ96N20 296 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 OR7D2Q96RA2 312 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 PRPF18Q99633 342 aaKnown RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 EBF4Q9BQW3 602 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SSBP3Q9BWW4 388 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 DPAGT1Q9H3H5 408 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 MARCH7Q9H992 704 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 NANOGQ9H9S0 305 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 EFCAB1Q9HAE3 211 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 RNPEPL1Q9HAU8 725 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SCPEP1Q9HB40 452 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 SIRT3Q9NTG7 399 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-207ENST00000520168 C1orf109Q9NX04 203 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 MKLN1Q9UL63 735 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 ZDHHC8Q9ULC8 765 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 FZR1Q9UM11 496 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 DNAH7Q8WXX0 4024 aa4.1□□□□□ -1.75
SDCBP-207ENST00000520168 TRBV23-1A0A0A0MS06 115 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 IGHV2-70DA0A0C4DH43 119 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MDFIC2A0A1B0GVS7 189 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms