RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CAMK2N2Q96S95 79 aa3.2□□□□□ -1.9
PTPN12-213ENST00000519553 PKIBQ9C010 78 aa3.2□□□□□ -1.9
PTPN12-213ENST00000519553 SPNS1Q9H2V7 528 aa3.2□□□□□ -1.9
PTPN12-213ENST00000519553 FAM49BQ9NUQ9 324 aa3.2□□□□□ -1.9
PTPN12-213ENST00000519553 RPL36A-HNRNPH2H7BZ11 118 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 BPY2O14599 106 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 NUPL2O15504 423 aaKnown RBP3.19□□□□□ -1.9
PTPN12-213ENST00000519553 APCSP02743 223 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 POLR2MP0CAP2 368 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 DCKP27707 260 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 SSTR5P35346 364 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 OR7A5Q15622 319 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 SAXO2Q658L1 398 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 CERS6Q6ZMG9 384 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 NANOGNBQ7Z5D8 188 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 CALHM1Q8IU99 346 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 PRELID2Q8N945 189 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 OSBPL11Q9BXB4 747 aa3.19□□□□□ -1.9
PTPN12-213ENST00000519553 DDX19AQ9NUU7 478 aaKnown RBP3.19□□□□□ -1.9
PTPN12-213ENST00000519553 TSSC4Q9Y5U2 329 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-213ENST00000519553 USP47Q96K76 1375 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 IGKV1D-17A0A075B6S4 117 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 SYNJ2BP-COX16A0A087WUM0 186 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 SOCS1O15524 211 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 RRP8O43159 456 aaKnown RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 KLHL41O60662 606 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 IGKV1-17P01599 117 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 OPRK1P41145 380 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 TNNT2P45379 298 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 CSNK1EP49674 416 aaKnown RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 ATP5IP56385 69 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 ZNF816Q0VGE8 651 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 CDH17Q12864 832 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 RCAN2Q14206 197 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 PPP1R7Q15435 360 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 SLC8B1Q6J4K2 584 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 FAM43BQ6ZT52 329 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 MYOCDQ8IZQ8 938 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 NECAP1Q8NC96 275 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 OR4K5Q8NGD3 323 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 PIFOQ8TCI5 191 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 FLYWCH2Q96CP2 140 aaKnown RBP3.18□□□□□ -1.9
PTPN12-213ENST00000519553 RMI2Q96E14 147 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 TPD52L3Q96J77 140 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 FOXC2Q99958 501 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 ULBP2Q9BZM5 246 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 VANGL2Q9ULK5 521 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 IKBKGQ9Y6K9 419 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 DOCK8Q8NF50 2099 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 AKNAQ7Z591 1439 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 YEATS2Q9ULM3 1422 aa3.18□□□□□ -1.9
PTPN12-213ENST00000519553 XKRY2A2RUG3 117 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 LRRIQ3A6PVS8 624 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-213ENST00000519553 PALMO75781 387 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 CCNE2O96020 404 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 CD3GP09693 182 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 ACSM4P0C7M7 580 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 C1GALT1C1LP0DN25 315 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 DTYMKP23919 212 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 KIR3DL2P43630 455 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 SLC11A1P49279 550 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 CHRNA6Q15825 494 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 DNLZQ5SXM8 178 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 METTL13Q8N6R0 699 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 OR7G2Q8NG99 324 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 ELMO1Q92556 727 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 TIMM17AQ99595 171 aa3.17□□□□□ -1.9
PTPN12-213ENST00000519553 COL27A1Q8IZC6 1860 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-213ENST00000519553 IGLV3-12A0A075B6K2 115 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 HEATR9A2RTY3 570 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 ZNF716A6NP11 495 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 ZNF735P0CB33 412 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 WARSP23381 471 aaKnown RBP3.16□□□□□ -1.9
PTPN12-213ENST00000519553 CALRP27797 417 aaKnown RBP3.16□□□□□ -1.9
PTPN12-213ENST00000519553 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
PTPN12-213ENST00000519553 SNRNP35Q16560 246 aaKnown RBP3.16□□□□□ -1.9
PTPN12-213ENST00000519553 XKR7Q5GH72 579 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 SOHLH1Q5JUK2 328 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 AVPI1Q5T686 147 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 CDKL3Q8IVW4 592 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-213ENST00000519553 OR10AD1Q8NGE0 317 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 OR56B2PQ8NGI1 322 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 OR6N1Q8NGY5 312 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 CIRBP-AS1Q8TBR5 109 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 ACMSDQ8TDX5 336 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 OR52D1Q9H346 318 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 LGALS13Q9UHV8 139 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 HPCAL4Q9UM19 191 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 S4R3C0 116 aa3.16□□□□□ -1.9
PTPN12-213ENST00000519553 IGHV1OR15-9A0A0B4J2B8 117 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 A8MUU9 505 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 CLOCKO15516 846 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 OR2J3O76001 311 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 CXCL12P48061 93 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 CDH6P55285 790 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 UBE2NP61088 152 aaKnown RBP3.15□□□□□ -1.91
PTPN12-213ENST00000519553 PPM1LQ5SGD2 360 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 TMEM150AQ86TG1 271 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 IQCKQ8N0W5 287 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms