RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SFXN5Q8TD22 340 aa12.24□□□□□ -0.45
PABPC1-208ENST00000519004 CCDC74AQ96AQ1 378 aa12.24□□□□□ -0.45
PABPC1-208ENST00000519004 STACQ99469 402 aa12.24□□□□□ -0.45
PABPC1-208ENST00000519004 FAM83CQ9BQN1 747 aa12.24□□□□□ -0.45
PABPC1-208ENST00000519004 SRMSQ9H3Y6 488 aa12.24□□□□□ -0.45
PABPC1-208ENST00000519004 KLK13Q9UKR3 277 aa12.24□□□□□ -0.45
PABPC1-208ENST00000519004 MTCL1Q9Y4B5 1905 aaKnown RBP12.24□□□□□ -0.45
PABPC1-208ENST00000519004 TRBV5-7A0A0A0MS05 114 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 RAMP1O60894 148 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 TXNDC12O95881 172 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 TRGC2P03986 189 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 ERCC1P07992 297 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 TACR3P29371 465 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 CYCSP99999 105 aaKnown RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 BEX3Q00994 111 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 EIF2B1Q14232 305 aaKnown RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 FAHD2BQ6P2I3 314 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 FAM129CQ86XR2 697 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 PRSS58Q8IYP2 241 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 OR4S1Q8NGB4 309 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 POC1BQ8TC44 478 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 SCAMP4Q969E2 229 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 FAHD2AQ96GK7 314 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 MRGPRX3Q96LB0 322 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 JSRP1Q96MG2 331 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 PARP12Q9H0J9 701 aaKnown RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 PDE7BQ9NP56 450 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 PRDM7Q9NQW5 492 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 MDC1Q14676 2089 aaKnown RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 DVL1O14640 695 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 DOK2O60496 412 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 TBL1XO60907 577 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 RPP14O95059 124 aaKnown RBP12.23□□□□□ -0.45
PABPC1-208ENST00000519004 APBB3O95704 486 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 TRGC1P0CF51 173 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 CFPP27918 469 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 SERPINA4P29622 427 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 CLN3Q13286 438 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 MOGAT2Q3SYC2 334 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 ARHGAP11AQ6P4F7 1023 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 SLC39A5Q6ZMH5 540 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 OR4K13Q8NH42 304 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 OR51F2Q8NH61 342 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 OR5AK2Q8NH90 309 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 ABHD5Q8WTS1 349 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 FAM3DQ96BQ1 224 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 KCNJ16Q9NPI9 418 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 ASCL3Q9NQ33 180 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 IL36AQ9UHA7 158 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 TRPV2Q9Y5S1 764 aa12.23□□□□□ -0.45
PABPC1-208ENST00000519004 A0A0G2JLL6 359 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 LOC100289279A0A1B0GTE1 492 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 SYNDIG1LA6NDD5 238 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 NME2P1O60361 137 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 SPARCP09486 303 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 IRF1P10914 325 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 CKBP12277 381 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 HIST1H1CP16403 213 aaKnown RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 GRPRP30550 384 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 GJA4P35212 333 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 IGFALSP35858 605 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 PBX2P40425 430 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 RABIFP47224 123 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 PSEN2P49810 448 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 DIO1P49895 249 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 PRRT2Q7Z6L0 340 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 FAM219AQ8IW50 185 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 DCAF4L2Q8NA75 395 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 NAXEQ8NCW5 288 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 OR10AC1Q8NH08 325 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 FAM174AQ8TBP5 190 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 PRRT1Q99946 306 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 SLC17A5Q9NRA2 495 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 FRRS1LQ9P0K9 344 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 ZNF107Q9UII5 783 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 TGIF2-C20orf24A0A0A6YYL0 155 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 CENPVL1A0A0U1RR11 272 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 TMEM269A0A1B0GVZ9 245 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 LEFTY2O00292 366 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 TAAR5O14804 337 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 OR13C7P0DN81 318 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 AKR1C4P17516 323 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 PBLDP30039 288 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 MAPK8P45983 427 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 ERVFRD-1P60508 538 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 UBE3DQ7Z6J8 389 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 OR13D1Q8NGV5 346 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 ZNF461Q8TAF7 563 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 TNFRSF13CQ96RJ3 184 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 SERTAD3Q9UJW9 196 aa12.22□□□□□ -0.45
PABPC1-208ENST00000519004 PUS1Q9Y606 427 aaKnown RBP eCLIP12.22□□□□□ -0.45
PABPC1-208ENST00000519004 A0A0G2JN53 185 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 GLOD5A6NK44 160 aa12.21□□□□□ -0.45
PABPC1-208ENST00000519004 SYT7O43581 403 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms