RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 LMO1P25800 156 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CD40LGP29965 261 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 HTR1FP30939 366 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 IFNA8P32881 189 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 WNT5AP41221 380 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CRYBB2P43320 205 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CXCL12P48061 93 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ATP12AP54707 1039 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 PSMD4P55036 377 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CDH11P55287 796 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CTBP2P56545 445 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 HSD17B7P56937 341 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 RPS25P62851 125 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 IFITM3Q01628 133 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 RAB40BQ12829 278 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 STX4Q12846 297 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 MLLT11Q13015 90 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SERTAD2Q14140 314 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF846Q147U1 533 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SPHARQ15513 63 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNHIT3Q15649 155 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CD226Q15762 336 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SRSF7Q16629 238 aaKnown RBP eCLIP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 OR2G6Q5TZ20 316 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 MORN5Q5VZ52 161 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF626Q68DY1 528 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 RAB12Q6IQ22 244 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 NIPAL1Q6NVV3 410 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 LINC00299Q6ZSB3 139 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 Q75L30 129 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 COX15Q7KZN9 410 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SNX29P2Q8IUI4 249 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 PHC2Q8IXK0 858 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 RNF113BQ8IZP6 322 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC34A3Q8N130 599 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CYP4Z2PQ8N1L4 340 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CENPSQ8N2Z9 138 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 TMEM99Q8N816 258 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF614Q8N883 585 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 Q8N9G6 341 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 UXS1Q8NBZ7 420 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 PROKR2Q8NFJ6 384 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 OR2T33Q8NG76 320 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 OR7G1Q8NGA0 311 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 OR4F15Q8NGB8 312 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 OSTF1Q92882 214 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC35B4Q969S0 331 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF524Q96C55 264 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF578Q96N58 590 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC38A2Q96QD8 506 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 OR1F2PQ96R84 312 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ATP6V0BQ99437 205 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 PELOQ9BRX2 385 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 HCAR1Q9BXC0 346 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 PRRG3Q9BZD7 231 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 EVA1AQ9H8M9 152 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 MED20Q9H944 212 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 MCCC2Q9HCC0 563 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 PRMT8Q9NR22 394 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 MED17Q9NVC6 651 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 KLHL9Q9P2J3 617 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 DHCR7Q9UBM7 475 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 ERGIC3Q9Y282 383 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 SIGLEC7Q9Y286 467 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 EXOGQ9Y2C4 368 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 EXOSC1Q9Y3B2 195 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 CSNK1G3Q9Y6M4 447 aa4.26□□□□□ -1.73
CTNNA1-212ENST00000518919 TP53BP1Q12888 1972 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ARID1BQ8NFD5 2236 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 IRGMA1A4Y4 181 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 FRG2CA6NGY1 282 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 FAM183AA6NL82 134 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 EFCAB7A8K855 629 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 C17orf51A8MQB3 221 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 A8MUA0 341 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 INAFM1C9JVW0 142 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF670-ZNF695F2Z2N8 137 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 TNFRSF13BO14836 293 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SULT1C4O75897 302 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GAGE7O76087 117 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 UTS2O95399 124 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 PPP1R3DO95685 299 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 PDGFBP01127 241 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 IFNA16P05015 189 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 HMGN1P05114 100 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC2A5P22732 501 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 LAMA1P25391 3075 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SSTR2P30874 369 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 RBM34P42696 430 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC1A3P43003 542 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 RFX2P48378 723 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 WNT4P56705 351 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 BPIFB3P59826 476 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms