RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SLC27A1Q6PCB7 646 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 NPNTQ6UXI9 565 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF620Q6ZNG0 422 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 C15orf39Q6ZRI6 1047 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 Q6ZTK2 550 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 PID1Q7Z2X4 250 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 COMMD6Q7Z4G1 85 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 KDM8Q8N371 416 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 C12orf76Q8N812 135 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR51S1Q8NGJ8 323 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZCCHC10Q8TBK6 192 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 BRIX1Q8TDN6 353 aaKnown RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADAMTS18Q8TE60 1221 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CXorf40AQ8TE69 158 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SDR42E1Q8WUS8 393 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HAS2Q92819 552 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BHQ93079 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADIPOR1Q96A54 375 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 MOB3AQ96BX8 217 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 FBXO17Q96EF6 278 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 PIK3IP1Q96FE7 263 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 C16orf58Q96GQ5 468 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATXN7L3BQ96GX2 97 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 WWC2-AS2Q96NR7 200 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 F2RL3Q96RI0 385 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 IMMP2LQ96T52 175 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BNQ99877 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BMQ99879 126 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC6A7Q99884 636 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTPN18Q99952 460 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 DOHHQ9BU89 302 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TSSK6Q9BXA6 273 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 MS4A8Q9BY19 250 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 LAT2Q9GZY6 243 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35B3Q9H1N7 401 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 BET1LQ9NYM9 111 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL17CQ9P0M4 197 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 H2AFY2Q9P0M6 372 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 RHCGQ9UBD6 479 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 VPS29Q9UBQ0 182 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF230Q9UIE0 474 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLEC4EQ9ULY5 219 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 OSGIN2Q9Y236 505 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TECPR2O15040 1411 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 QSER1Q2KHR3 1735 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 GBF1Q92538 1859 aa4.35□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRAV1-2A0A0B4J238 106 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 IGHV2-70DA0A0C4DH43 119 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 NPEPPSL1A6NEC2 478 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM166BA8MTA8 275 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 A8MVM7 634 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM86B1E9PN63 330 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 F5H5T6 163 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 HAS3O00219 553 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF264O43296 627 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 XRCC3O43542 346 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SOX15O60248 233 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 NME2P1O60361 137 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLDN11O75508 207 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TNFSF13O75888 250 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCGNO76038 276 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 MT-ND4P03905 459 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 LIPFP07098 398 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SFTPBP07988 381 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 FCGR3AP08637 254 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 CTSAP10619 480 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACP2P11117 423 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 F3P13726 295 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATF1P18846 271 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 DRD5P21918 477 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 HNRNPA2B1P22626 353 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ANOS1P23352 680 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 CXCR1P25024 350 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 IMPA1P29218 277 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 EPHA2P29317 976 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SREBF1P36956 1147 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 GDF5P43026 501 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPL29P47914 159 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZFP36L2P47974 494 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC6A9P48067 706 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 CRISP3P54108 245 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 OAZ1P54368 228 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 GEMP55040 296 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCAND1P57086 179 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM33P57088 247 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 YBEYP58557 167 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 UBE2KP61086 200 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 PPP2CBP62714 309 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRA2BP62995 288 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 PPP2CAP67775 309 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDK3Q00526 305 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 HGFACQ04756 655 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 BCL2L1Q07817 233 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TGM3Q08188 693 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 RBBP4Q09028 425 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 PIN1Q13526 163 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TSTA3Q13630 321 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB31Q13636 194 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAF13Q15543 124 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ELAVL1Q15717 326 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms