RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 RAB3AP20336 220 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PAX7P23759 505 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CEACAM3P40198 252 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 VHLP40337 213 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MDH1P40925 334 aaKnown RBP0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GALR1P47211 349 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PRLHRP49683 370 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PPP1CBP62140 327 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CCNA1P78396 465 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CDK5Q00535 292 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 KRTAP21-3Q3LHN1 58 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 HSP90AA5PQ58FG0 334 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SPECC1LQ69YQ0 1117 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GUSBP11Q6P575 273 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 DHDDSQ86SQ9 333 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TICAM2Q86XR7 235 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SLC35G3Q8N808 338 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SERPINB12Q96P63 405 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CNN2Q99439 309 aaKnown RBP0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PKMYT1Q99640 499 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SEC22CQ9BRL7 303 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PARD6BQ9BYG5 372 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZSCAN16Q9H4T2 348 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 EDA2RQ9HAV5 297 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 POLE3Q9NRF9 147 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RAB23Q9ULC3 237 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MCTS1Q9ULC4 181 aaKnown RBP0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MAPK8IP3Q9UPT6 1336 aa0.88□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGHV1-3A0A0C4DH29 117 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FAM47DPA6NHR8 397 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 OVOL1O14753 267 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CHMP2AO43633 222 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 KRT13P13646 458 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GRIA1P42261 906 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 HCAR3P49019 387 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 P2RX1P51575 399 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ATP1B3P54709 279 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CDKN2DP55273 166 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FAM53BQ14153 422 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PYDC2Q56P42 97 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TEX30Q5JUR7 227 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 STUMQ69YW2 141 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZFAND6Q6FIF0 208 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CNSTQ6PJW8 725 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CCDC73Q6ZRK6 1079 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ARL10Q8N8L6 244 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RHEBL1Q8TAI7 183 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CXorf40AQ8TE69 158 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GALNT14Q96FL9 552 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PANX2Q96RD6 677 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RBBP8Q99708 897 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 NMRAL1Q9HBL8 299 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RHBDL2Q9NX52 303 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ODF2LQ9ULJ1 636 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 AURKCQ9UQB9 309 aa0.87□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGHV3-49A0A0A0MS15 119 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ARHGEF35A5YM69 484 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SURF6O75683 361 aaKnown RBP0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PAHP00439 452 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 LHBP01229 141 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGLV7-43P04211 117 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGKV1-16P04430 117 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 HEXBP07686 556 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 OR5H8P0DN80 308 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 DBTP11182 482 aaKnown RBP0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PRMT2P55345 433 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PDZK1Q5T2W1 519 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RIPPLY2Q5TAB7 128 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MED27Q6P2C8 311 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SPNS3Q6ZMD2 512 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZNF101Q8IZC7 436 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FAM83FQ8NEG4 500 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TRPV1Q8NER1 839 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 C10orf35Q96D05 121 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PLEKHA8Q96JA3 519 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 SLC7A8Q9UHI5 535 aa0.86□□□□□ -2.27
RNU6-1088P-201ENST00000516850 BAHCC1Q9P281 2608 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PPP1R2P9O14990 202 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 DPM1O60762 260 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IGHV3-11P01762 117 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PABPC4LP0CB38 370 aaKnown RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 IFI30P13284 250 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZNF35P13682 527 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 LOXP28300 417 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MXD1Q05195 221 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 FGL1Q08830 312 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 QPRTQ15274 297 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 H3F3CQ6NXT2 135 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 PRSS54Q6PEW0 395 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 MORN3Q6PF18 240 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 Q6ZPB1 254 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 DENND4AQ7Z401 1863 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZSCAN30Q86W11 494 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 GTPBP8Q8N3Z3 284 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 UBE2Q2Q8WVN8 375 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 RLN3Q8WXF3 142 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 EMG1Q92979 244 aaKnown RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 ZBED3Q96IU2 234 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 CHCHD7Q9BUK0 85 aa0.85□□□□□ -2.27
RNU6-1088P-201ENST00000516850 TAS2R3Q9NYW6 316 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms