RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 HIST2H2ABQ8IUE6 130 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 C1orf158Q8N1D5 194 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 DENND6BQ8NEG7 585 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 CNIH3Q8TBE1 160 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 HIST1H2ACQ93077 130 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 TMBIM1Q969X1 311 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 BSCL2Q96G97 398 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZC2HC1AQ96GY0 325 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 MRPL45Q9BRJ2 306 aaKnown RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 Q9BRP9 147 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 OSBPL10Q9BXB5 764 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 CRNKL1Q9BZJ0 848 aaKnown RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 POLR1EQ9GZS1 481 aaKnown RBP-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 PDE7BQ9NP56 450 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 OR2S2Q9NQN1 319 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ETNK2Q9NVF9 386 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 TMOD2Q9NZR1 351 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 PRO2289Q9P1D8 64 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ACOT9Q9Y305 439 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 ICOSQ9Y6W8 199 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 CADP27708 2225 aa-2.13□□□□□ -2.75
RNU6-542P-201ENST00000516405 TRAV19A0A0A6YYK7 116 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 A0A0J9YX75 114 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 A0A1B0GUS0 222 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ARHGEF37A1IGU5 675 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 J3QQQ9 107 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 K7EIL1 84 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ALOX15BO15296 676 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ST8SIA3O43173 380 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 SLC22A5O76082 557 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 UTS2O95399 124 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 RAB3DO95716 219 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 FYNP06241 537 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 HRH1P35367 487 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ACTN2P35609 894 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 BDKRB1P46663 353 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 NKX2-5P52952 324 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPL26P61254 145 aaKnown RBP-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 SRYQ05066 204 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZNF33AQ06730 810 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ARHGAP1Q07960 439 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 G3BP1Q13283 466 aaKnown RBP eCLIP-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 MORF4L2Q15014 288 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 PARP6Q2NL67 630 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 MLIPQ5VWP3 458 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 GPR139Q6DWJ6 353 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 FAHD2BQ6P2I3 314 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 TEX43Q6ZNM6 134 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 SIAH3Q8IW03 269 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ANKRD13AQ8IZ07 590 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ARFGAP2Q8N6H7 521 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 MRGPRFQ96AM1 343 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 SPATA13Q96N96 652 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 ECT2Q9H8V3 914 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 MRPL15Q9P015 296 aaKnown RBP-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 SEC14L3Q9UDX4 400 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPL26L1Q9UNX3 145 aaKnown RBP-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 NAV1Q8NEY1 1877 aa-2.14□□□□□ -2.75
RNU6-542P-201ENST00000516405 USP42Q9H9J4 1324 aaKnown RBP-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 PTPRKQ15262 1439 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 ARAP3Q8WWN8 1544 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 IGKV1-12A0A0C4DH73 117 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 A0A1W2PRG6 482 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 ANKRD18BA2A2Z9 1011 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 UGT2B17O75795 530 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 IGKV1D-12P01611 117 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SERPINF2P08697 491 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 ESDP10768 282 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 H2AFXP16104 143 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 AHCYP23526 432 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 AK4P27144 223 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 ANXA13P27216 316 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 HOXA6P31267 233 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 RNASE4P34096 147 aaKnown RBP-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 MAS1LP35410 378 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 MAP2K4P45985 399 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 HTR5AP47898 357 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SIGLEC14Q08ET2 396 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 RIPPLY1Q0D2K3 151 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SCRN3Q0VDG4 424 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 KRT32Q14532 448 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 MICBQ29980 383 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SLC25A35Q3KQZ1 300 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SPIN4Q56A73 249 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 C9orf135Q5VTT2 229 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 HIST2H2AA3Q6FI13 130 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 Q6ZS92 163 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 STHQ8IWL8 128 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 AMN1Q8IY45 258 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 C15orf54Q8N8G6 183 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 ATP6V0D2Q8N8Y2 350 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 MSANTD4Q8NCY6 345 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 PNPT1Q8TCS8 783 aaKnown RBP-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SDR42E1Q8WUS8 393 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 GALNT14Q96FL9 552 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SDSLQ96GA7 329 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 RSRC1Q96IZ7 334 aaKnown RBP-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 NPY6RQ99463 290 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 FAM60AQ9NP50 221 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 SLC17A5Q9NRA2 495 aa-2.15□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms