RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 E9PQ18 207 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 TLX2O43763 284 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 RRP9O43818 475 aaKnown RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 DOK2O60496 412 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 SLC2A5P22732 501 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 GSTT1P30711 240 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 CALCRP30988 508 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 GDI2P50395 445 aaKnown RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 RPS7P62081 194 aaKnown RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 HIST1H3AP68431 136 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 GALK2Q01415 458 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 DBPQ10586 325 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 RAB35Q15286 201 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 PCK2Q16822 640 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 OGFRL1Q5TC84 451 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 HIST2H3PS2Q5TEC6 136 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 LCN1P1Q5VSP4 162 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 SLC18B1Q6NT16 456 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 ZNF774Q6NX45 483 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 PAMR1Q6UXH9 720 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 UNQ6126/PRO20091Q6UXV3 157 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 HIST2H3AQ71DI3 136 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 VASH1Q7L8A9 365 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 GID4Q8IVV7 300 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 ZNF511Q8NB15 262 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 AKR7LQ8NHP1 331 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 ZNRF4Q8WWF5 429 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 IPCEF1Q8WWN9 437 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 POM121L2Q96KW2 1035 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 INTS14Q96SY0 518 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 PITX2Q99697 317 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 HDHD2Q9H0R4 259 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 MARCH7Q9H992 704 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 UBTD1Q9HAC8 227 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 CISD1Q9NZ45 108 aaKnown RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 H2AFY2Q9P0M6 372 aaPredicted RBP10.31□□□□□ -0.76
SNF8-215ENST00000515572 APCP25054 2843 aa10.31□□□□□ -0.76
SNF8-215ENST00000515572 DSCAMO60469 2012 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 FBN2P35556 2912 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 OR6C6A6NF89 314 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ZNF593O00488 134 aaPredicted RBP10.3□□□□□ -0.76
SNF8-215ENST00000515572 RER1O15258 196 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ICMTO60725 284 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 RAF1P04049 648 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 SPARCP09486 303 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 NR4A1P22736 598 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 APEX1P27695 318 aaKnown RBP10.3□□□□□ -0.76
SNF8-215ENST00000515572 PCSK6P29122 969 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 HTR5AP47898 357 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ECH1Q13011 328 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 RIPK1Q13546 671 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 APOFQ13790 326 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ELFN2Q5R3F8 820 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 AADACL4Q5VUY2 407 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 OTPQ5XKR4 325 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ZNF544Q6NX49 715 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 CORO6Q6QEF8 472 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ARL9Q6T311 187 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 SHFQ7M4L6 423 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 C1orf174Q8IYL3 243 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 GALNT4Q8N4A0 578 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ZNF555Q8NEP9 628 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 OR1F12Q8NHA8 337 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 FAM81AQ8TBF8 368 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 NINJ1Q92982 152 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 RFKQ969G6 155 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 IL4I1Q96RQ9 567 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 TEAD3Q99594 435 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 COQ7Q99807 217 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 DHRS9Q9BPW9 319 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 ZNF442Q9H7R0 627 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 WDR76Q9H967 626 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 CA10Q9NS85 328 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 FAM118AQ9NWS6 357 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 EIF3KQ9UBQ5 218 aaKnown RBP10.3□□□□□ -0.76
SNF8-215ENST00000515572 NKX1-2Q9UD57 310 aaPredicted RBP10.3□□□□□ -0.76
SNF8-215ENST00000515572 ST6GALNAC2Q9UJ37 374 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 GDF2Q9UK05 429 aaPredicted RBP10.3□□□□□ -0.76
SNF8-215ENST00000515572 GMPPBQ9Y5P6 360 aa10.3□□□□□ -0.76
SNF8-215ENST00000515572 SETXQ7Z333 2677 aaKnown RBP10.29□□□□□ -0.76
SNF8-215ENST00000515572 LOC100509620A0A075B734 347 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 LOC100130705A0A1B0GUX0 176 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 C5orf49A4QMS7 147 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 SLC22A31A6NKX4 558 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 E7EQL1 145 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 SLC16A6O15403 523 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 SYNGR3O43761 229 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 MPZL2O60487 215 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 APOBEC3AP31941 199 aaPredicted RBP10.29□□□□□ -0.76
SNF8-215ENST00000515572 RAD52P43351 418 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 RPS23P62266 143 aaKnown RBP10.29□□□□□ -0.76
SNF8-215ENST00000515572 SNRPGP62308 76 aaKnown RBP10.29□□□□□ -0.76
SNF8-215ENST00000515572 NKX6-1P78426 367 aaPredicted RBP10.29□□□□□ -0.76
SNF8-215ENST00000515572 HGFACQ04756 655 aa10.29□□□□□ -0.76
SNF8-215ENST00000515572 SNTB2Q13425 540 aaKnown RBP10.29□□□□□ -0.76
SNF8-215ENST00000515572 TMED1Q13445 227 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms