RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NMNAT3Q96T66 252 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 SYT3Q9BQG1 590 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 PIMREGQ9BSJ6 248 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
CLCN3-210ENST00000515420 ELOVL3Q9HB03 270 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 EMC7Q9NPA0 242 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 VNN3Q9NY84 501 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 REV1Q9UBZ9 1251 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 POMPQ9Y244 141 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 NF1P21359 2839 aa10.97□□□□□ -0.65
CLCN3-210ENST00000515420 ZFHX3Q15911 3703 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 DCTN6O00399 190 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 GSC2O15499 205 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 DOK2O60496 412 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 GAAP10253 952 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 CCNOP22674 350 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 GIFP27352 417 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 WNT5AP41221 380 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 HIST1H3AP68431 136 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 KRTAP1-1Q07627 177 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 HIST2H3PS2Q5TEC6 136 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 MBNL2Q5VZF2 373 aaKnown RBP10.96□□□□□ -0.65
CLCN3-210ENST00000515420 ZNF774Q6NX45 483 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 UGT2A3Q6UWM9 527 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 HIST2H3AQ71DI3 136 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 VASH1Q7L8A9 365 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-210ENST00000515420 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 OR6V1Q8N148 313 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 PAPD5Q8NDF8 572 aaKnown RBP10.96□□□□□ -0.65
CLCN3-210ENST00000515420 SLC26A10Q8NG04 563 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 OR10G2Q8NGC3 310 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 OR1J1Q8NGS3 322 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 OR4K13Q8NH42 304 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 GIPC3Q8TF64 312 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 SNX33Q8WV41 574 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 CADM1Q9BY67 442 aaKnown RBP10.96□□□□□ -0.65
CLCN3-210ENST00000515420 RERGLQ9H628 205 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 EGLN3Q9H6Z9 239 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 RPRD1BQ9NQG5 326 aaKnown RBP10.96□□□□□ -0.65
CLCN3-210ENST00000515420 TBC1D23Q9NUY8 699 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 PLEK2Q9NYT0 353 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 CGGBP1Q9UFW8 167 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-210ENST00000515420 DUSP13Q9UII6 198 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 KCNG2Q9UJ96 466 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 B9D1Q9UPM9 204 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 U3KQV3 271 aa10.96□□□□□ -0.65
CLCN3-210ENST00000515420 A0A1W2PPW3 197 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 OR6C68A6NDL8 312 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 OR6C6A6NF89 314 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 TLX2O43763 284 aaPredicted RBP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 LY6HO94772 140 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 MT-ND5P03915 603 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 TP53P04637 393 aaPredicted RBP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 DAOP14920 347 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 GCH1P30793 250 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 HTR5AP47898 357 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 ARHGDIAP52565 204 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 ERVS71-1P61550 626 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 MRPS11P82912 194 aaKnown RBP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 NKPD1Q17RQ9 610 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 PCGF3Q3KNV8 242 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF718Q3SXZ3 478 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 CLEC12AQ5QGZ9 265 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 LRP11Q86VZ4 500 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 SPATA24Q86W54 205 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF786Q8N393 782 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 NPEPL1Q8NDH3 523 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 SDR9C7Q8NEX9 313 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 GJC3Q8NFK1 279 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 OR2T33Q8NG76 320 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 OR52E2Q8NGJ4 325 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 OR8D4Q8NGM9 314 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 MARS2Q96GW9 593 aaKnown RBP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 C4orf45Q96LM5 186 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 COG8Q96MW5 612 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 TSSK2Q96PF2 358 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 DDOQ99489 341 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 PLA2G12AQ9BZM1 189 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 HDHD2Q9H0R4 259 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 TBCCD1Q9NVR7 557 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 NKIRAS2Q9NYR9 191 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 MYEF2Q9P2K5 600 aaKnown RBP10.95□□□□□ -0.66
CLCN3-210ENST00000515420 ASH2LQ9UBL3 628 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 KLHL21Q9UJP4 597 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 POLR1DQ9Y2S0 133 aa10.95□□□□□ -0.66
CLCN3-210ENST00000515420 FN1P02751 2386 aaKnown RBP10.94□□□□□ -0.66
CLCN3-210ENST00000515420 GNGT2O14610 69 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 CD5LO43866 347 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 MPZL1O95297 269 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 ABHD16AO95870 558 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 CLPTM1O96005 669 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 USF1P22415 310 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-210ENST00000515420 LIPAP38571 399 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 NR4A2P43354 598 aa10.94□□□□□ -0.66
CLCN3-210ENST00000515420 RGS6P49758 472 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms