RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 BBS1Q8NFJ9 593 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 OR2AP1Q8NGE2 309 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 OR9G4Q8NGQ1 327 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 FRAT1Q92837 279 aaPredicted RBP3.73□□□□□ -1.81
RFC1-216ENST00000514572 CDX2Q99626 313 aaPredicted RBP3.73□□□□□ -1.81
RFC1-216ENST00000514572 EBF4Q9BQW3 602 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 NTN4Q9HB63 628 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 ZNF275Q9NSD4 429 aaPredicted RBP3.73□□□□□ -1.81
RFC1-216ENST00000514572 EXD2Q9NVH0 621 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 MRPL22Q9NWU5 206 aaKnown RBP3.73□□□□□ -1.81
RFC1-216ENST00000514572 XCL2Q9UBD3 114 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 BTNL2Q9UIR0 455 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 NEUROG3Q9Y4Z2 214 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 LOC285556D6RIA3 1793 aa3.73□□□□□ -1.81
RFC1-216ENST00000514572 COL2A1P02458 1487 aaPredicted RBP3.73□□□□□ -1.81
RFC1-216ENST00000514572 CFAP54Q96N23 3096 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 MAST2Q6P0Q8 1798 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 KLF18A0A0U1RQI7 1052 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 EPOPA6NHQ4 379 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 MGRN1O60291 552 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 HUS1O60921 280 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 EEDO75530 441 aaKnown RBP3.72□□□□□ -1.81
RFC1-216ENST00000514572 ERLIN2O94905 339 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 MYL2P10916 166 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 SRMP19623 302 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 BCKDHBP21953 392 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 GPR6P46095 362 aaPredicted RBP3.72□□□□□ -1.81
RFC1-216ENST00000514572 OR3A4PP47883 348 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 CX3CR1P49238 355 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 P2RY4P51582 365 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 DIO3P55073 304 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 CLDN18P56856 261 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 PDIA2Q13087 525 aaKnown RBP3.72□□□□□ -1.81
RFC1-216ENST00000514572 CYTH1Q15438 398 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 LRRC26Q2I0M4 334 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 MFSD14CQ5VZR4 134 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 CTRB2Q6GPI1 263 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 TWF2Q6IBS0 349 aaKnown RBP3.72□□□□□ -1.81
RFC1-216ENST00000514572 ZNF571Q7Z3V5 609 aaPredicted RBP3.72□□□□□ -1.81
RFC1-216ENST00000514572 TMEM135Q86UB9 458 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 PDIK1LQ8N165 341 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 ZNF485Q8NCK3 441 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 OR2G2Q8NGZ5 317 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 GSDMAQ96QA5 445 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 TSG101Q99816 390 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 NAT9Q9BTE0 207 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 OR51J1Q9H342 316 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 SRMSQ9H3Y6 488 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 CLSTN2Q9H4D0 955 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 C8orf33Q9H7E9 229 aaPredicted RBP3.72□□□□□ -1.81
RFC1-216ENST00000514572 CD274Q9NZQ7 290 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 TRAF3IP3Q9Y228 551 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 SLC17A4Q9Y2C5 497 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 RHBDD3Q9Y3P4 386 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 PLXNB2O15031 1838 aa3.72□□□□□ -1.81
RFC1-216ENST00000514572 PSMB11A5LHX3 300 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 SMCO2A6NFE2 343 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 ZNF726A6NNF4 738 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 AIM2O14862 343 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 EIF4E2O60573 245 aaKnown RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 EIF3GO75821 320 aaKnown RBP eCLIP3.71□□□□□ -1.82
RFC1-216ENST00000514572 SNAI1O95863 264 aaPredicted RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 PLEKP08567 350 aaPredicted RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 PRKACAP17612 351 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 VDAC2P45880 294 aaPredicted RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 RFX3P48380 749 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 CARD18P57730 90 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 YWHAGP61981 247 aaKnown RBP eCLIP3.71□□□□□ -1.82
RFC1-216ENST00000514572 PPM1LQ5SGD2 360 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 OR52W1Q6IF63 320 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 ZNF620Q6ZNG0 422 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 CEND1Q8N111 149 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 OR52E5Q8NH55 327 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 OR9G1Q8NH87 305 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 RHEBL1Q8TAI7 183 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 TMEM54Q969K7 222 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 TOP1MTQ969P6 601 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 FCRL1Q96LA6 429 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 XPO6Q96QU8 1125 aaKnown RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 RARRES2Q99969 163 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 BLZF1Q9H2G9 400 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 PTGES2Q9H7Z7 377 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 MRPL47Q9HD33 250 aaKnown RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 AIG1Q9NVV5 245 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 ASF1AQ9Y294 204 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 CDH10Q9Y6N8 788 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 LTBP2Q14767 1821 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 TPRP12270 2363 aaKnown RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 ZNFX1Q9P2E3 1918 aaKnown RBP3.71□□□□□ -1.82
RFC1-216ENST00000514572 CDK5RAP2Q96SN8 1893 aa3.71□□□□□ -1.82
RFC1-216ENST00000514572 MROH7-TTC4A0A0A0MT08 1334 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 FAM186AA6NE01 2351 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 CACNA1GO43497 2377 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 ZFHX2Q9C0A1 2572 aaPredicted RBP3.7□□□□□ -1.82
RFC1-216ENST00000514572 USP34Q70CQ2 3546 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 IGKV1D-13A0A0B4J2D9 117 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 FAM231BA6NCW3 169 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 CDC7O00311 574 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 IGKV1-13P0DP09 117 aa3.7□□□□□ -1.82
RFC1-216ENST00000514572 FOLR1P15328 257 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms