RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SCRG1O75711 98 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 APOL3O95236 402 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 GBAP04062 536 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 CLPSP04118 112 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 UBBP0CG47 229 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 UBCP0CG48 685 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 PRG2P13727 222 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 TNFSF4P23510 183 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RORAP35398 523 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 THBS4P35443 961 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 IFNGR2P38484 337 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 OR12D2P58182 307 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RPS27AP62979 156 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 UBA52P62987 128 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 IDNKQ5T6J7 187 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RPL13AP3Q6NVV1 102 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RPL22L1Q6P5R6 122 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SKA3Q8IX90 412 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 CSNK1A1LQ8N752 337 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 PXT1Q8NFP0 134 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 OR13C8Q8NGS7 320 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RAB40AQ8WXH6 277 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 MS4A6EQ96DS6 147 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 OR2A5Q96R48 311 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 LYRM4Q9HD34 91 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 EXOSC4Q9NPD3 245 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 GSN-AS1Q9NRJ2 163 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF224Q9NZL3 707 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 FLRT3Q9NZU0 649 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 FBLN5Q9UBX5 448 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 C19orf25Q9UFG5 118 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 IL19Q9UHD0 177 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 PADI1Q9ULC6 663 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 MRPS33Q9Y291 106 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SLC35A3Q9Y2D2 325 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 PCNX2A6NKB5 2137 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 TMEM150CB9EJG8 249 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 BCL2L11O43521 198 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 F13BP05160 661 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SRMP19623 302 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 ZBTB25P24278 435 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RBM34P42696 430 aaKnown RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 KHKP50053 298 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 TMPRSS3P57727 454 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 LGALS3BPQ08380 585 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 POU4F2Q12837 409 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 TEX30Q5JUR7 227 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RPTNQ6XPR3 784 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 VRK2Q86Y07 508 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 BEST4Q8NFU0 473 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 OR4K14Q8NGD5 310 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SMAP2Q8WU79 429 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 CDS1Q92903 461 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RAB8BQ92930 207 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 LRRC46Q96FV0 321 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RNF126Q9BV68 326 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SEC11CQ9BY50 192 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 NOX3Q9HBY0 568 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 RDH8Q9NYR8 311 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 ASH2LQ9UBL3 628 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 FBXL4Q9UKA2 621 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 DMRT1Q9Y5R6 373 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 TRAPPC13A5PLN9 417 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SSX5O60225 188 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 GPRIN2O60269 458 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 STK17BO94768 372 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 TMIGD3P0DMS9 266 aaPredicted RBP6.64□□□□□ -1.35
CLIP1-205ENST00000514271 FSTP19883 344 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 S1PR1P21453 382 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 FAM111BQ6SJ93 734 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 ASB18Q6ZVZ8 466 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 POMGNT2Q8NAT1 580 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 PTX4Q96A99 478 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SLC41A3Q96GZ6 507 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 C4orf36Q96KX1 117 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 OR52D1Q9H346 318 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 SERINC1Q9NRX5 453 aa6.64□□□□□ -1.35
CLIP1-205ENST00000514271 A0A1W2PRG6 482 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 PRSS44E7EML9 344 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 OR2T7P0C7T2 308 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 ZNF44P15621 663 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 ANXA7P20073 488 aaKnown RBP6.63□□□□□ -1.35
CLIP1-205ENST00000514271 DCTDP32321 178 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 ST3GAL3Q11203 375 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 SNTB2Q13425 540 aaKnown RBP6.63□□□□□ -1.35
CLIP1-205ENST00000514271 CBFBQ13951 182 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 SLC35D3Q5M8T2 416 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 ABLIM2Q6H8Q1 611 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 CDC73Q6P1J9 531 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 C3orf33Q6P1S2 294 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 LSRQ86X29 649 aaPredicted RBP6.63□□□□□ -1.35
CLIP1-205ENST00000514271 NUDT13Q86X67 352 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 CDC20BQ86Y33 519 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 SDR9C7Q8NEX9 313 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 OR2T27Q8NH04 317 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 ZCCHC14Q8WYQ9 949 aaKnown RBP6.63□□□□□ -1.35
CLIP1-205ENST00000514271 ELMOD3Q96FG2 381 aa6.63□□□□□ -1.35
CLIP1-205ENST00000514271 IL17FQ96PD4 163 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms