RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MGARPQ8TDB4 240 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 C2CD4CQ8TF44 421 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 RAB40AQ8WXH6 277 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 C11orf40Q8WZ69 217 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CCL17Q92583 94 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 DDIT4LQ96D03 193 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 RNFT2Q96EX2 444 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 GIMAP5Q96F15 307 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 THOC1Q96FV9 657 aaKnown RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CFAP36Q96G28 342 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 MS4A4EQ96PG1 132 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 LYSTQ99698 3801 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CCDC106Q9BWC9 280 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 NMUR2Q9GZQ4 415 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 EGLN1Q9GZT9 426 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 RBM38Q9H0Z9 239 aaKnown RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 DPAGT1Q9H3H5 408 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM165Q9HC07 324 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 A4GALTQ9NPC4 353 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CYSLTR2Q9NS75 346 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 FARSBQ9NSD9 589 aaKnown RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 TAAR3PQ9P1P4 343 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 ZMAT5Q9UDW3 170 aaKnown RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 OR5V1Q9UGF6 321 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC7A8Q9UHI5 535 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 PCTPQ9UKL6 214 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CHMP2BQ9UQN3 213 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 NPTNQ9Y639 398 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 RYR1P21817 5038 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 STAB2Q8WWQ8 2551 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF816-ZNF321PA0A0X1KG74 233 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM272A0A1B0GTI8 110 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 A0A1W2PPW3 197 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 E7ESA3 106 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 E9PQ18 207 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MANBAO00462 879 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 TSPAN4O14817 238 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MGRN1O60291 552 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GPR137BO60478 399 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 BANF1O75531 89 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 RSL1D1O76021 490 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 DUS4LO95620 317 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 FSTL3O95633 263 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV3-13P01766 116 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 SERPINA5P05154 406 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 HMGN2P05204 90 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 C2P06681 752 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GPIP06744 558 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 LIPFP07098 398 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GSTA2P09210 222 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 RBP1P09455 135 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 WNT2P09544 360 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ACP2P11117 423 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 LYL1P12980 280 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF14P17017 642 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 FRKP42685 505 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 KIR2DS4P43632 304 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 IER3P46695 156 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GPR12P47775 334 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 FNTAP49354 379 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 KLF3P57682 345 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ARF1P84077 181 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ROR2Q01974 943 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GUCY2DQ02846 1103 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF763Q0D2J5 394 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 NPRL3Q12980 569 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 SKP2Q13309 424 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 CAMK2DQ13557 499 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 PDE7AQ13946 482 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 IL13RA2Q14627 380 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MAD2L1BPQ15013 274 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 PPP1R7Q15435 360 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GPR68Q15743 365 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF141Q15928 474 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GSTA3Q16772 222 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GSG1Q2KHT4 349 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ESCO2Q56NI9 601 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 GPR157Q5UAW9 335 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 CAVIN1Q6NZI2 390 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 C6orf89Q6UWU4 347 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 RNF144BQ7Z419 303 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MDP1Q86V88 176 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MYPOPQ86VE0 399 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 SNX32Q86XE0 403 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 PTOV1Q86YD1 416 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 CENPLQ8N0S6 344 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MUC20Q8N307 709 aaPredicted RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 NATD1Q8N6N6 113 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM99Q8N816 258 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 FBXO36Q8NEA4 188 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 OR4F17Q8NGA8 305 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF563Q8TA94 476 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 METTL6Q8TCB7 284 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 NPRL2Q8WTW4 380 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 CNOT9Q92600 299 aaKnown RBP3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 PHF21AQ96BD5 680 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF524Q96C55 264 aa3.01□□□□□ -1.93
PDLIM5-218ENST00000513341 MTERF3Q96E29 417 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms