RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 LRP5LA4QPB2 252 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 AHCYL1O43865 530 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 GASTP01350 101 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 COL8A2P25067 703 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 IFNGR2P38484 337 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 HTR5AP47898 357 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 TRIP10Q15642 601 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 ZNF770Q6IQ21 691 aaPredicted RBP14.1□□□□□ -0.15
DDX41-213ENST00000512027 JAZF1Q86VZ6 243 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 PRIMA1Q86XR5 153 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 GLB1L2Q8IW92 636 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 ZNF786Q8N393 782 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 OR8D4Q8NGM9 314 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 YIPF5Q969M3 257 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 ASB9Q96DX5 294 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 OR2J1Q9GZK6 312 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 C1orf21Q9H246 121 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 MS4A5Q9H3V2 200 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 POFUT1Q9H488 388 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 MAGIXQ9H6Y5 334 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 SRA1Q9HD15 236 aaKnown RBP14.1□□□□□ -0.15
DDX41-213ENST00000512027 RPRD1BQ9NQG5 326 aaKnown RBP14.1□□□□□ -0.15
DDX41-213ENST00000512027 ASH2LQ9UBL3 628 aa14.1□□□□□ -0.15
DDX41-213ENST00000512027 SVEP1Q4LDE5 3571 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 ACOT8O14734 319 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 SGCEO43556 437 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 KRT36O76013 467 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 CCNB2O95067 398 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 GAAP10253 952 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 APEHP13798 732 aaKnown RBP14.09□□□□□ -0.15
DDX41-213ENST00000512027 IL2RGP31785 369 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 ERFP50548 548 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 HMGA2P52926 109 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 FAM98BQ52LJ0 330 aaKnown RBP14.09□□□□□ -0.15
DDX41-213ENST00000512027 VASH1Q7L8A9 365 aaPredicted RBP14.09□□□□□ -0.15
DDX41-213ENST00000512027 ADGRG5Q8IZF4 528 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 OR6V1Q8N148 313 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 AQP11Q8NBQ7 271 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 MARS2Q96GW9 593 aaKnown RBP14.09□□□□□ -0.15
DDX41-213ENST00000512027 LRGUKQ96M69 825 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 PLEK2Q9NYT0 353 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 EIF3KQ9UBQ5 218 aaKnown RBP14.09□□□□□ -0.15
DDX41-213ENST00000512027 B9D1Q9UPM9 204 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 CDH10Q9Y6N8 788 aa14.09□□□□□ -0.15
DDX41-213ENST00000512027 OR6C68A6NDL8 312 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 C17orf100A8MU93 164 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 A8MV72 311 aaPredicted RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 ARPC3O15145 178 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 RER1O15258 196 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 TLX2O43763 284 aaPredicted RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 CRLF1O75462 422 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 SOX14O95416 240 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 DBHP09172 617 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 GIFP27352 417 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 NOS3P29474 1203 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 SELENOVP59797 346 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 PPP1CBP62140 327 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 CCL8P80075 99 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDX41-213ENST00000512027 SCRN3Q0VDG4 424 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 HNRNPA0Q13151 305 aaKnown RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 AQP6Q13520 282 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 RIN1Q13671 783 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 CCDC92Q53HC0 331 aaPredicted RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 OR2T5Q6IEZ7 315 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 CORO6Q6QEF8 472 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 SYT9Q86SS6 491 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 CYB561A3Q8NBI2 242 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 OR52E2Q8NGJ4 325 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 OR2T29Q8NH02 315 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 KLF14Q8TD94 323 aaPredicted RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 SNX33Q8WV41 574 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 SLC7A6OSQ96CW6 309 aaPredicted RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 C4orf45Q96LM5 186 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 SNX18Q96RF0 628 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 TRIM15Q9C019 465 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 NARFLQ9H6Q4 476 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 HINT3Q9NQE9 182 aaKnown RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 NDRG4Q9ULP0 352 aaKnown RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 POLR1DQ9Y2S0 133 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 SAMHD1Q9Y3Z3 626 aaKnown RBP14.08□□□□□ -0.16
DDX41-213ENST00000512027 LHFPL6Q9Y693 200 aa14.08□□□□□ -0.16
DDX41-213ENST00000512027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.08□□□□□ -0.162e-6■■□□□ 13.5
DDX41-213ENST00000512027 CDC14BO60729 498 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 LILRA1O75019 489 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 ABHD16AO95870 558 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 RENP00797 406 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 IGHV3-13P01766 116 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 ZNF23P17027 643 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 CRABP1P29762 137 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 GCH1P30793 250 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 TSTQ16762 297 aaKnown RBP14.07□□□□□ -0.16
DDX41-213ENST00000512027 KRTAP21-3Q3LHN1 58 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 ZNF718Q3SXZ3 478 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 TMEM154Q6P9G4 183 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 DNM1P34Q6PK57 102 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 LINC00346Q8IVM7 164 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 CANT1Q8WVQ1 401 aa14.07□□□□□ -0.16
DDX41-213ENST00000512027 MSI2Q96DH6 328 aaKnown RBP14.07□□□□□ -0.16
DDX41-213ENST00000512027 REEP1Q9H902 201 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms