RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 COL8A2P25067 703 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 HIST1H3AP68431 136 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 MAD2L1BPQ15013 274 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 CCDC92Q53HC0 331 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 SLC35F1Q5T1Q4 408 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 HIST2H3PS2Q5TEC6 136 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 LEG1Q6P5S2 330 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 HIST2H3AQ71DI3 136 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 ZBTB46Q86UZ6 589 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 ZNF786Q8N393 782 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 AQP11Q8NBQ7 271 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 OR52E2Q8NGJ4 325 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 OR1J1Q8NGS3 322 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 UBASH3BQ8TF42 649 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 MARS2Q96GW9 593 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 POM121Q96HA1 1249 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 C4orf45Q96LM5 186 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 DGCR6LQ9BY27 220 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 PLA2G12AQ9BZM1 189 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 DYNLRB1Q9NP97 96 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 MYOZ1Q9NP98 299 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 TAAR3PQ9P1P4 343 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 CDH10Q9Y6N8 788 aa13.82□□□□□ -0.2
PDLIM5-216ENST00000511767 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 DHRS12A0PJE2 317 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 M0R233 179 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 RENP00797 406 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 CST1P01037 141 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 TFP02787 698 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 NAT2P11245 290 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 GIFP27352 417 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 NOS3P29474 1203 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 NR4A2P43354 598 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 SELENOVP59797 346 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 SCRN3Q0VDG4 424 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 RSPO1Q2MKA7 263 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 ZNF718Q3SXZ3 478 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 CLEC12AQ5QGZ9 265 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 RPL13AP3Q6NVV1 102 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 CD300LDQ6UXZ3 194 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 TMEM179BQ7Z7N9 219 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 C1orf174Q8IYL3 243 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 PAPD5Q8NDF8 572 aaKnown RBP13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 OR8D4Q8NGM9 314 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 FEVQ99581 238 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 KLHL21Q9UJP4 597 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 JMJD1CQ15652 2540 aa13.81□□□□□ -0.2
PDLIM5-216ENST00000511767 LYNX1G3V0Z9 82 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 SGCEO43556 437 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 HPXP02790 462 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 ERCC1P07992 297 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 LYNX1P0DP58 116 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 GAAP10253 952 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 HOXB6P17509 224 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 GSTM3P21266 225 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 USF1P22415 310 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 CENPAP49450 140 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 KLF3P57682 345 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 COX10Q12887 443 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 AQP6Q13520 282 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 GK3PQ14409 553 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 MOGQ16653 247 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 MEP1BQ16820 701 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 ELFN2Q5R3F8 820 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 DNM1P34Q6PK57 102 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 VASH1Q7L8A9 365 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 JAZF1Q86VZ6 243 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 LNX2Q8N448 690 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 ZNF540Q8NDQ6 660 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 SLC26A10Q8NG04 563 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 OR1F12Q8NHA8 337 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 SLC25A40Q8TBP6 338 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 GIPC3Q8TF64 312 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 SLCO4A1Q96BD0 722 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 TSSK6Q9BXA6 273 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 TPK1Q9H3S4 243 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 RPRD1BQ9NQG5 326 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 TBCCD1Q9NVR7 557 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 ASH2LQ9UBL3 628 aa13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 NDRG4Q9ULP0 352 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-216ENST00000511767 ABCA2Q9BZC7 2435 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 OR6C6A6NF89 314 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 RER1O15258 196 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 CD5LO43866 347 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 ATP5HO75947 161 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 TEKQ02763 1124 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 RIN1Q13671 783 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 FLOT2Q14254 428 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 CARTPTQ16568 116 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 TMEM249Q2WGJ8 235 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 ALKBH6Q3KRA9 238 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 TMEM255AQ5JRV8 349 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 MBNL2Q5VZF2 373 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 UNQ6126/PRO20091Q6UXV3 157 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 SPATA24Q86W54 205 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 SDR9C7Q8NEX9 313 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 GJC3Q8NFK1 279 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 OR10G2Q8NGC3 310 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms