RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SLC38A5Q8WUX1 472 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 SKA2Q8WVK7 121 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-208ENST00000511604 ZBTB8AQ96BR9 441 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 RCC1LQ96I51 464 aaKnown RBP6.63□□□□□ -1.35
CPNE4-208ENST00000511604 HCAR1Q9BXC0 346 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 OR2J1Q9GZK6 312 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 NELFAQ9H3P2 528 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 METTL8Q9H825 291 aaKnown RBP6.63□□□□□ -1.35
CPNE4-208ENST00000511604 VPS29Q9UBQ0 182 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 PUS1Q9Y606 427 aaKnown RBP eCLIP6.63□□□□□ -1.35
CPNE4-208ENST00000511604 PATJQ8NI35 1801 aa6.63□□□□□ -1.35
CPNE4-208ENST00000511604 H7BY64 318 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 J3QLW9 94 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 GEMIN2O14893 280 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 GLSO94925 669 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 RPP14O95059 124 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 SCAF4O95104 1147 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 SNAI1O95863 264 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 F11P03951 625 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CD3DP04234 171 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ZNF19P17023 458 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 FUT1P19526 365 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 DTYMKP23919 212 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 FGF8P55075 233 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 BATFQ16520 125 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CCSMST1Q4G0I0 132 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 GGTA1PQ4G0N0 100 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 EXOSC6Q5RKV6 272 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 MTSS1LQ765P7 747 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 OR10H4Q8NGA5 316 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 AUTS2Q8WXX7 1259 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 SMARCD2Q92925 531 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 C4orf36Q96KX1 117 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 GFI1Q99684 422 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 FNDC11Q9BVV2 318 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 COMMD4Q9H0A8 199 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 SLC35B3Q9H1N7 401 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 TAF9BQ9HBM6 251 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 NRIP3Q9NQ35 241 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 HINT3Q9NQE9 182 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 HAO2Q9NYQ3 351 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 C5AR2Q9P296 337 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 OR5V1Q9UGF6 321 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 NTNG1Q9Y2I2 539 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 DYRK1BQ9Y463 629 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 FRMPD3Q5JV73 1810 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 A0A087WWC5 75 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 MSGN1A6NI15 193 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 EEF1E1-BLOC1S5C9J1V9 151 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 TMEM127O75204 238 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 DCNP07585 359 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 MRPL3P09001 348 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PGA4P0DJD7 388 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PGA5P0DJD9 388 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CHRNB4P30926 498 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PNPLA4P41247 253 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 SGSHP51688 502 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PNLIPRP1P54315 467 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PFN3P60673 137 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACTBP60709 375 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACTA2P62736 377 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACTG1P63261 375 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACTG2P63267 376 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACTC1P68032 377 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACTA1P68133 377 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACSM2AQ08AH3 577 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 MRPL49Q13405 166 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ACSM2BQ68CK6 577 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 NIPAL3Q6P499 406 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CHST9Q7L1S5 443 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 NUP54Q7Z3B4 507 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 C17orf64Q86WR6 236 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CPOQ8IVL8 374 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 SCN4BQ8IWT1 228 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 GABRG1Q8N1C3 465 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 COMMD1Q8N668 190 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PLPP5Q8NEB5 264 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 OR8S1Q8NH09 359 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 MIB2Q96AX9 1013 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 TMEM19Q96HH6 336 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 TP53RKQ96S44 253 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 RNF2Q99496 336 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 RNF126Q9BV68 326 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CXorf36Q9H7Y0 433 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 IL17CQ9P0M4 197 aa6.62□□□□□ -1.35
CPNE4-208ENST00000511604 USP36Q9P275 1121 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 PRG3Q9Y2Y8 225 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 CHD3Q12873 2000 aaKnown RBP6.62□□□□□ -1.35
CPNE4-208ENST00000511604 ZNF831Q5JPB2 1677 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 ZNF264O43296 627 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 AHSA1O95433 338 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 OR13C7P0DN81 318 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 FGF5P12034 268 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 KCNE1P15382 129 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 PCSK1P29120 753 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 PYCR1P32322 319 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 TSFMP43897 325 aaKnown RBP6.61□□□□□ -1.35
CPNE4-208ENST00000511604 OR12D2P58182 307 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 DLK1P80370 383 aa6.61□□□□□ -1.35
CPNE4-208ENST00000511604 NR0B2Q15466 257 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms