RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 HCAR1Q9BXC0 346 aa11.14□□□□□ -0.63
COL6A6-203ENST00000511332 HDHD2Q9H0R4 259 aa11.14□□□□□ -0.63
COL6A6-203ENST00000511332 MED20Q9H944 212 aa11.14□□□□□ -0.63
COL6A6-203ENST00000511332 HINT3Q9NQE9 182 aaKnown RBP11.14□□□□□ -0.63
COL6A6-203ENST00000511332 PLEK2Q9NYT0 353 aa11.14□□□□□ -0.63
COL6A6-203ENST00000511332 LHFPL6Q9Y693 200 aa11.14□□□□□ -0.63
COL6A6-203ENST00000511332 E7EQL1 145 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 ATE1O95260 518 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 NR4A1P22736 598 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 EPHA2P29317 976 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 HTR5AP47898 357 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 ENTPD1P49961 510 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 CDC42P60953 191 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 RPS7P62081 194 aaKnown RBP11.13□□□□□ -0.63
COL6A6-203ENST00000511332 KLHL12Q53G59 568 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 KRT80Q6KB66 452 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 SLC18B1Q6NT16 456 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 ZNF771Q7L3S4 317 aaPredicted RBP11.13□□□□□ -0.63
COL6A6-203ENST00000511332 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
COL6A6-203ENST00000511332 FBXL14Q8N1E6 418 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 PACRGLQ8N7B6 248 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 SMAP2Q8WU79 429 aaPredicted RBP11.13□□□□□ -0.63
COL6A6-203ENST00000511332 PIGTQ969N2 578 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 INTS14Q96SY0 518 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 OR51V1Q9H2C8 321 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 ZNF442Q9H7R0 627 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 CA10Q9NS85 328 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 MRPL22Q9NWU5 206 aaKnown RBP11.13□□□□□ -0.63
COL6A6-203ENST00000511332 IMPAD1Q9NX62 359 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 CYB5R1Q9UHQ9 305 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 PLEKHA6Q9Y2H5 1048 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 ROS1P08922 2347 aa11.13□□□□□ -0.63
COL6A6-203ENST00000511332 C5orf49A4QMS7 147 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 TVP23AA6NH52 213 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 VSTM5A8MXK1 200 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 SYNGR3O43761 229 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 PRKYO43930 277 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 SPARCP09486 303 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 SLC2A5P22732 501 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 PEX2P28328 305 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 PCSK6P29122 969 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 GSTT1P30711 240 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 APOBEC3AP31941 199 aaPredicted RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 GGT2P36268 569 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 FABP6P51161 128 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 HIST1H3AP68431 136 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 NKX6-1P78426 367 aaPredicted RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 HGFACQ04756 655 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 DBPQ10586 325 aaPredicted RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 TEX30Q5JUR7 227 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 ELFN2Q5R3F8 820 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 HIST2H3PS2Q5TEC6 136 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 LINC01590Q5TEZ4 76 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 AGAP6Q5VW22 663 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 OTPQ5XKR4 325 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 ARL9Q6T311 187 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 HIST2H3AQ71DI3 136 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 LINC00346Q8IVM7 164 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 GID4Q8IVV7 300 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 MUC15Q8N387 334 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 FAM81AQ8TBF8 368 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 TMEM163Q8TC26 289 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 TMEM171Q8WVE6 324 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 ZNRF4Q8WWF5 429 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 IPCEF1Q8WWN9 437 aaPredicted RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 PTP4A1Q93096 173 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 HRASLS5Q96KN8 279 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 POM121L2Q96KW2 1035 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 COQ7Q99807 217 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 BCL2L14Q9BZR8 327 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 VCXQ9H320 206 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 LIME1Q9H400 295 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 TOR3AQ9H497 397 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 CXorf56Q9H5V9 222 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 MARCH7Q9H992 704 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 SMPD3Q9NY59 655 aaPredicted RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 EIF3KQ9UBQ5 218 aaKnown RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 GDF2Q9UK05 429 aaPredicted RBP11.12□□□□□ -0.63
COL6A6-203ENST00000511332 AKAP6Q13023 2319 aa11.12□□□□□ -0.63
COL6A6-203ENST00000511332 LOC100509620A0A075B734 347 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 OR6C6A6NF89 314 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 M0R129 80 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 CASQ2O14958 399 aaPredicted RBP11.11□□□□□ -0.63
COL6A6-203ENST00000511332 RER1O15258 196 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 TLX2O43763 284 aaPredicted RBP11.11□□□□□ -0.63
COL6A6-203ENST00000511332 ICMTO60725 284 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 DANCRP0C864 163 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 CCL2P13500 99 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 CD53P19397 219 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 CCNOP22674 350 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 TTKP33981 857 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 POLR2IP36954 125 aaKnown RBP11.11□□□□□ -0.63
COL6A6-203ENST00000511332 RAD52P43351 418 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 ECH1Q13011 328 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 APOFQ13790 326 aa11.11□□□□□ -0.63
COL6A6-203ENST00000511332 PCK2Q16822 640 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms