RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	PEX16	Q9Y5Y5	336 aa		10.81	□□□□□ -0.68
CAST-233	ENST00000510756	WDFY3	Q8IZQ1	3526 aa		10.81	□□□□□ -0.68
CAST-233	ENST00000510756	H2BFM	P0C1H6	154 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	PSKH1	P11801	424 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	RPS11	P62280	158 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	SCRN3	Q0VDG4	424 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ENDOG	Q14249	297 aa	Known RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	CARD17	Q5XLA6	110 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	FNDC9	Q8TBE3	224 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ACOT12	Q8WYK0	555 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	TRMT61A	Q96FX7	289 aa	Known RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	TAAR6	Q96RI8	345 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	MRI1	Q9BV20	369 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	TMED9	Q9BVK6	235 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ZCCHC4	Q9H5U6	513 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	PALMD	Q9NP74	551 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	GALNT8	Q9NY28	637 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	CNTRL	Q7Z7A1	2325 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	WDR1	O75083	606 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	GPANK1	O95872	356 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	UBC	P0CG48	685 aa	Known RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ACHE	P22303	614 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	NR4A1	P22736	598 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	MYL9	P24844	172 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	CFP	P27918	469 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	OTX1	P32242	354 aa	Predicted RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ETV6	P41212	452 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	PSMA6	P60900	246 aa	Known RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	LSM3	P62310	102 aa	Known RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	SRY	Q05066	204 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756		Q499Y3	187 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ACSM3	Q53FZ2	586 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ZMAT1	Q5H9K5	638 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	PHYHD1	Q5SRE7	291 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	TMEM244	Q5VVB8	128 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	C22orf42	Q6IC83	251 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	KLHL24	Q6TFL4	600 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	CCDC36	Q8IYA8	594 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ZFP41	Q8N8Y5	198 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	OR6Q1	Q8NGQ2	317 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	GPR148	Q8TDV2	347 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	SMAP2	Q8WU79	429 aa	Predicted RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	APH1A	Q96BI3	265 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	AMELY	Q99218	206 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	HDHD2	Q9H0R4	259 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	SEC61A2	Q9H9S3	476 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	PNRC2	Q9NPJ4	139 aa	Known RBP	10.8	□□□□□ -0.68
CAST-233	ENST00000510756	FRRS1L	Q9P0K9	344 aa		10.8	□□□□□ -0.68
CAST-233	ENST00000510756	ZNF587B	E7ETH6	402 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	MPZL1	O95297	269 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	INHBB	P09529	407 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	COX5B	P10606	129 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	HOXB1	P14653	301 aa	Predicted RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	OR3A2	P47893	321 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	PSMD7	P51665	324 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	NANOS3	P60323	173 aa	Known RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	PMP22	Q01453	160 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	SLC3A1	Q07837	685 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	KRTAP27-1	Q3LI81	207 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	NSUN5P2	Q63ZY6	315 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	IL17RD	Q8NFM7	739 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	MCFD2	Q8NI22	146 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	WDFY2	Q96P53	400 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	FOXB1	Q99853	325 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	WDR12	Q9GZL7	423 aa	Known RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	MALT1	Q9UDY8	824 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	NUFIP1	Q9UHK0	495 aa	Known RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	POLR1D	Q9Y2S0	133 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	TRBV5-7	A0A0A0MS05	114 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	PDCD5	O14737	125 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	ZFPL1	O95159	310 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	FARS2	O95363	451 aa	Known RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	PDGFA	P04085	211 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	ZNF12	P17014	697 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	PAX7	P23759	505 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	AGTR1	P30556	359 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	NTF4	P34130	210 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	ROR2	Q01974	943 aa	Known RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	RAB35	Q15286	201 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	FAM180A	Q6UWF9	173 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	LRRN1	Q6UXK5	716 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756		Q6ZSR3	168 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	CEACAM19	Q7Z692	300 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	TMEM203	Q969S6	136 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	ABHD17A	Q96GS6	310 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	KCNJ15	Q99712	375 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	RBM24	Q9BX46	236 aa	Known RBP	10.79	□□□□□ -0.68
CAST-233	ENST00000510756	HDHD5	Q9BXW7	423 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	FAM206A	Q9NX38	181 aa		10.79	□□□□□ -0.68
CAST-233	ENST00000510756	RPS19	P39019	145 aa	Known RBP	10.78	□□□□□ -0.68
CAST-233	ENST00000510756	SCAND1	P57086	179 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	TUSC5	Q8IXB3	177 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	OR10S1	Q8NGN2	331 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	RELT	Q969Z4	430 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	CMTM3	Q96MX0	182 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	ZNF416	Q9BWM5	594 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	CRLF2	Q9HC73	371 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	HMG20A	Q9NP66	347 aa		10.78	□□□□□ -0.68
CAST-233	ENST00000510756	ZNF391	Q9UJN7	358 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms