RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SAMD8Q96LT4 415 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 EGLN1Q9GZT9 426 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 KCNN2Q9H2S1 579 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 NTN4Q9HB63 628 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 RHCGQ9UBD6 479 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 ZDHHC8Q9ULC8 765 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 MED31Q9Y3C7 131 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 A0A1W2PPL8 197 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 H0YL77 283 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 TIMM8AO60220 97 aaPredicted RBP13.34□□□□□ -0.27
RAB40C-202ENST00000509637 DBHP09172 617 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 KITLGP21583 273 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 TMEM155Q4W5P6 130 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 CYBRD1Q53TN4 286 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 INTS11Q5TA45 600 aaKnown RBP13.34□□□□□ -0.27
RAB40C-202ENST00000509637 OR2Z1Q8NG97 314 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 OR13C2Q8NGS9 318 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF420Q8TAQ5 688 aaPredicted RBP13.34□□□□□ -0.27
RAB40C-202ENST00000509637 ST7LQ8TDW4 575 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 C10orf82Q8WW14 230 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 HAVCR1Q96D42 359 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 BPIFA2Q96DR5 249 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 RABEP2Q9H5N1 569 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 CYSLTR2Q9NS75 346 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 ADAM18Q9Y3Q7 739 aa13.34□□□□□ -0.27
RAB40C-202ENST00000509637 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 CEACAM18A8MTB9 384 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 TMEM178BH3BS89 294 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 H3BSA7 217 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 EDF1O60869 148 aaKnown RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 SELEP16581 610 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 MDKP21741 143 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 MSR1P21757 451 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 LIPAP38571 399 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 BTG1P62324 171 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 DEFA6Q01524 100 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 SLC3A1Q07837 685 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 BAMBIQ13145 260 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 HLXQ14774 488 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 TAF11Q15544 211 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 RSPO1Q2MKA7 263 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 CCDC92Q53HC0 331 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 MESTQ5EB52 335 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
RAB40C-202ENST00000509637 NRMQ8IXM6 262 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 POU5F2Q8N7G0 328 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 Q96M85 177 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 RBP7Q96R05 134 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 TMEM165Q9HC07 324 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 WNK1Q9H4A3 2382 aa13.33□□□□□ -0.28
RAB40C-202ENST00000509637 A0A087WUU8 490 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 GPANK1O95872 356 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 PLATP00750 562 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 CTLA4P16410 223 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 OMGP23515 440 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 KDELR2P33947 212 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 MMP16P51512 607 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 PRSS12P56730 875 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 PRKCDQ05655 676 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 SF3A3Q12874 501 aaKnown RBP eCLIP13.32□□□□□ -0.28
RAB40C-202ENST00000509637 PDLIM3Q53GG5 364 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-202ENST00000509637 ARMCX4Q5H9R4 360 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 LEG1Q6P5S2 330 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 TREML4Q6UXN2 200 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 FAM122BQ7Z309 247 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 HDDC2Q7Z4H3 204 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 VTCN1Q7Z7D3 282 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 OR5AS1Q8N127 324 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 OR2V2Q96R30 315 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 DIRC2Q96SL1 478 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
RAB40C-202ENST00000509637 POLR2J3Q9H1A7 115 aaKnown RBP13.32□□□□□ -0.28
RAB40C-202ENST00000509637 ELOVL3Q9HB03 270 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 GCM1Q9NP62 436 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 TGP01266 2768 aa13.32□□□□□ -0.28
RAB40C-202ENST00000509637 ABHD16AO95870 558 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-202ENST00000509637 COX5BP10606 129 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 ANOS1P23352 680 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 KRTAP10-3P60369 221 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 CGB2Q6NT52 195 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 LYPD2Q6UXB3 125 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 SYT9Q86SS6 491 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 ALDH16A1Q8IZ83 802 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 OR8J3Q8NGG0 315 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 RASSF5Q8WWW0 418 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 PRRC1Q96M27 445 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
RAB40C-202ENST00000509637 STX18Q9P2W9 335 aaKnown RBP13.31□□□□□ -0.28
RAB40C-202ENST00000509637 CGGBP1Q9UFW8 167 aaPredicted RBP13.31□□□□□ -0.28
RAB40C-202ENST00000509637 A0A0G2JND7 137 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 OR6C6A6NF89 314 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 MLNRO43193 412 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 DOK2O60496 412 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 GPR4P46093 362 aa13.3□□□□□ -0.28
RAB40C-202ENST00000509637 HTR5AP47898 357 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms