RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CLDN22Q8N7P3 220 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 OR4F5Q8NH21 305 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 SGTBQ96EQ0 304 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 ATP6V1G3Q96LB4 118 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 OR2V2Q96R30 315 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 PCDHAC1Q9H158 963 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 MMP27Q9H306 513 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 MARCH7Q9H992 704 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 C20orf141Q9NUB4 165 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 ARMCX1Q9P291 453 aa13.4□□□□□ -0.26
CXCL1-202ENST00000509101 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 GMNCA6NCL1 334 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 TMEM178BH3BS89 294 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 M0QZ24 198 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 ZNF205O95201 554 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 VIMP08670 466 aaKnown RBP13.39□□□□□ -0.27
CXCL1-202ENST00000509101 CST2P09228 141 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 WNT2P09544 360 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 NR2C1P13056 603 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 MTPNP58546 118 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 GNB2P62879 340 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 SELPLGQ14242 412 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 RUNDC3AQ59EK9 446 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 OLFML2AQ68BL7 652 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 ARL9Q6T311 187 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 FIP1L1Q6UN15 594 aaKnown RBP13.39□□□□□ -0.27
CXCL1-202ENST00000509101 NKAIN4Q8IVV8 208 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 POU5F2Q8N7G0 328 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 OR10S1Q8NGN2 331 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 TMEM255BQ8WV15 326 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
CXCL1-202ENST00000509101 CITED1Q99966 193 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 MAN2C1Q9NTJ4 1040 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 ARGLU1Q9NWB6 273 aaPredicted RBP13.39□□□□□ -0.27
CXCL1-202ENST00000509101 IL19Q9UHD0 177 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 TIMM10BQ9Y5J6 103 aa13.39□□□□□ -0.27
CXCL1-202ENST00000509101 SRRM5B3KS81 715 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 SURF4O15260 269 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 CRYBA1P05813 215 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 THRBP10828 461 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 KITLGP21583 273 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 ERFP50548 548 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 PCBD1P61457 104 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 RELBQ01201 579 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 ENDOGQ14249 297 aaKnown RBP13.38□□□□□ -0.27
CXCL1-202ENST00000509101 AGKQ53H12 422 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 ZNF362Q5T0B9 420 aaPredicted RBP13.38□□□□□ -0.27
CXCL1-202ENST00000509101 DLEU7Q6UYE1 221 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 RHOUQ7L0Q8 258 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 DHDDSQ86SQ9 333 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 KLBQ86Z14 1044 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 ZNF420Q8TAQ5 688 aaPredicted RBP13.38□□□□□ -0.27
CXCL1-202ENST00000509101 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 RAB40AQ8WXH6 277 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 UBE2FQ969M7 185 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 TAMM41Q96BW9 452 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 EBF4Q9BQW3 602 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 TXNIPQ9H3M7 391 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 VIPAS39Q9H9C1 493 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
CXCL1-202ENST00000509101 NDRG4Q9ULP0 352 aaKnown RBP13.38□□□□□ -0.27
CXCL1-202ENST00000509101 NPIPB13A6NJU9 1138 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 NPIPB4C9JG80 1138 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 TIMM23O14925 209 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 CYB5R3P00387 301 aaPredicted RBP13.37□□□□□ -0.27
CXCL1-202ENST00000509101 TSPAN19P0C672 248 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 HTR5AP47898 357 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 PATL1Q86TB9 770 aaKnown RBP13.37□□□□□ -0.27
CXCL1-202ENST00000509101 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 OR5AS1Q8N127 324 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 DACT3Q96B18 629 aaPredicted RBP13.37□□□□□ -0.27
CXCL1-202ENST00000509101 CMBLQ96DG6 245 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 ALG12Q9BV10 488 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 CHIAQ9BZP6 476 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
CXCL1-202ENST00000509101 PIP5K1CO60331 668 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 DOK2O60496 412 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 TNFRSF1BP20333 461 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 MSR1P21757 451 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
CXCL1-202ENST00000509101 GUCA1AP43080 201 aaPredicted RBP13.36□□□□□ -0.27
CXCL1-202ENST00000509101 IDH3AP50213 366 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 TAS2R41P59536 307 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 KRTAP10-3P60369 221 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 ALG10Q5BKT4 473 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 SLC27A4Q6P1M0 643 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 FOXL2NBQ6ZUU3 175 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 IGFN1Q86VF2 1251 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 OR10AD1Q8NGE0 317 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 NEIL1Q96FI4 390 aaPredicted RBP13.36□□□□□ -0.27
CXCL1-202ENST00000509101 PLEKHA8Q96JA3 519 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 RBP7Q96R05 134 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 RBM4BQ9BQ04 359 aaKnown RBP13.36□□□□□ -0.27
CXCL1-202ENST00000509101 NUDT16L1Q9BRJ7 211 aaKnown RBP13.36□□□□□ -0.27
CXCL1-202ENST00000509101 TMEM165Q9HC07 324 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms