RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 LIMS1P48059 325 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 GDI2P50395 445 aaKnown RBP13.79□□□□□ -0.2
LMNA-222ENST00000508500 FXYD6P3P58550 94 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 SELENOVP59797 346 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 FLOT2Q14254 428 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 TSTQ16762 297 aaKnown RBP13.79□□□□□ -0.2
LMNA-222ENST00000508500 ZBED5Q49AG3 693 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 AVPI1Q5T686 147 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 FAM205BPQ63HN1 556 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 TMEM154Q6P9G4 183 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 FNDC8Q8TC99 324 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 KLF14Q8TD94 323 aaPredicted RBP13.79□□□□□ -0.2
LMNA-222ENST00000508500 STMN2Q93045 179 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 FAM46AQ96IP4 442 aaKnown RBP13.79□□□□□ -0.2
LMNA-222ENST00000508500 C7orf34Q96L11 122 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 KCTD14Q9BQ13 255 aaPredicted RBP13.79□□□□□ -0.2
LMNA-222ENST00000508500 C19orf24Q9BVV8 132 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 POFUT1Q9H488 388 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 LPAR2Q9HBW0 351 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 POLE4Q9NR33 117 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 NDUFAF4Q9P032 175 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 ACTR3BQ9P1U1 418 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 KLHL21Q9UJP4 597 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 SIGLEC7Q9Y286 467 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 TIMM10BQ9Y5J6 103 aa13.79□□□□□ -0.2
LMNA-222ENST00000508500 A6NIZ1 184 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 ZSCAN5BA6NJL1 495 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 AQP12BA6NM10 295 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 DIRAS1O95057 198 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 IGHV1-46P01743 117 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 CD14P08571 375 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 MSR1P21757 451 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 RAP1BP61224 184 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 RAP1AP62834 184 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 MVKQ03426 396 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 KPNB1Q14974 876 aaKnown RBP13.78□□□□□ -0.2
LMNA-222ENST00000508500 SEC23BQ15437 767 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 PCGF3Q3KNV8 242 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 ZNF718Q3SXZ3 478 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 MBNL2Q5VZF2 373 aaKnown RBP13.78□□□□□ -0.2
LMNA-222ENST00000508500 ZFP1Q6P2D0 407 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 THSD4Q6ZMP0 1018 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 USP51Q70EK9 711 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 DHFR2Q86XF0 187 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 AQP12AQ8IXF9 295 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 SNX33Q8WV41 574 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 FAM162AQ96A26 154 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 DUS3LQ96G46 650 aaKnown RBP13.78□□□□□ -0.2
LMNA-222ENST00000508500 FUZQ9BT04 418 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 ANKRD19PQ9H560 264 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 GPR160Q9UJ42 338 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 MAGEL2Q9UJ55 1249 aa13.78□□□□□ -0.2
LMNA-222ENST00000508500 IGHV1-69-2A0A0G2JMI3 117 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 TRBV4-1A0A0J9YWV2 114 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.21
LMNA-222ENST00000508500 GMNNO75496 209 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 TFP02787 698 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 MSMBP08118 114 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 CTLA4P16410 223 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 OMPP47874 163 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 ZNF81P51508 661 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 PPP1CBP62140 327 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 GLYATQ6IB77 296 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 LCN8Q6JVE9 175 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 C1orf229Q6ZS94 237 aaPredicted RBP13.77□□□□□ -0.21
LMNA-222ENST00000508500 RNF148Q8N7C7 305 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 ABHD4Q8TB40 342 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 CCDC124Q96CT7 223 aaKnown RBP13.77□□□□□ -0.21
LMNA-222ENST00000508500 RASD2Q96D21 266 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 C4orf45Q96LM5 186 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 GPA33Q99795 319 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 NRIP3Q9NQ35 241 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 DCAF13Q9NV06 445 aaKnown RBP13.77□□□□□ -0.21
LMNA-222ENST00000508500 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 EIF3KQ9UBQ5 218 aaKnown RBP13.77□□□□□ -0.21
LMNA-222ENST00000508500 IL20RAQ9UHF4 553 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 WIPI2Q9Y4P8 454 aa13.77□□□□□ -0.21
LMNA-222ENST00000508500 A0A1W2PRQ8 180 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 PRSS37A4D1T9 235 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 SPRY3O43610 288 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 MPZL1O95297 269 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 AVPP01185 164 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 H1F0P07305 194 aaKnown RBP13.76□□□□□ -0.21
LMNA-222ENST00000508500 GCH1P30793 250 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
LMNA-222ENST00000508500 MS4A2Q01362 244 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 DBPQ10586 325 aaPredicted RBP13.76□□□□□ -0.21
LMNA-222ENST00000508500 DGCR6Q14129 220 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 PTCHD4Q6ZW05 846 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 SYT9Q86SS6 491 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 GLCCI1Q86VQ1 547 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 ALDH16A1Q8IZ83 802 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 DHRS1Q96LJ7 313 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 LRGUKQ96M69 825 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 GRHPRQ9UBQ7 328 aa13.76□□□□□ -0.21
LMNA-222ENST00000508500 TENM1Q9UKZ4 2725 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms